Information for 12-KCAKTTAACTGMCTCS (Motif 19)

C A G T G A T C T C G A A C G T A G C T G A C T C T G A G T C A T A G C A G C T T C A G G T C A A T G C C A G T A G T C T A C G
Reverse Opposite:
A T C G C T A G G C T A A T C G C A G T A G T C C T G A A C T G A C G T A G C T C G T A C T G A T G A C A C G T C T A G G T C A
p-value:1e-5
log p-value:-1.248e+01
Information Content per bp:1.615
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif17.65%
Number of Background Sequences with motif83.1
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets41.7 +/- 36.3bp
Average Position of motif in Background53.1 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0081.1_Tcf1_1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---KCAKTTAACTGMCTCS
NNNTTAGTTAACTNANN--
 A C G T A C G T A C G T C A G T G A T C T C G A A C G T A G C T G A C T C T G A G T C A T A G C A G C T T C A G G T C A A T G C C A G T A G T C T A C G
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T A C G T A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---KCAKTTAACTGMCTCS
NTTTTAGTTAACNNAGN--
 A C G T A C G T A C G T C A G T G A T C T C G A A C G T A G C T G A C T C T G A G T C A T A G C A G C T T C A G G T C A A T G C C A G T A G T C T A C G
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:forward strand
Alignment:KCAKTTAACTGMCTCS
----CCAACTGCCA--
 C A G T G A T C T C G A A C G T A G C T G A C T C T G A G T C A T A G C A G C T T C A G G T C A A T G C C A G T A G T C T A C G
A C G T A C G T A C G T A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:4
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:KCAKTTAACTGMCTCS
----TTAAGTGC----
 C A G T G A T C T C G A A C G T A G C T G A C T C T G A G T C A T A G C A G C T T C A G G T C A A T G C C A G T A G T C T A C G
A C G T A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:KCAKTTAACTGMCTCS
-----YAACBGCC---
 C A G T G A T C T C G A A C G T A G C T G A C T C T G A G T C A T A G C A G C T T C A G G T C A A T G C C A G T A G T C T A C G
A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T A C G T A C G T

MYBL1/MA0776.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:KCAKTTAACTGMCTCS
ACCGTTAACGGT----
 C A G T G A T C T C G A A C G T A G C T G A C T C T G A G T C A T A G C A G C T T C A G G T C A A T G C C A G T A G T C T A C G
C T G A T G A C T A G C T C A G G A C T G C A T C G T A T C G A G T A C A T C G C A T G G A C T A C G T A C G T A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-KCAKTTAACTGMCTCS
AGCTGTTAACTAGCCGT
 A C G T C A G T G A T C T C G A A C G T A G C T G A C T C T G A G T C A T A G C A G C T T C A G G T C A A T G C C A G T A G T C T A C G
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:KCAKTTAACTGMCTCS
----CCAACTGCCA--
 C A G T G A T C T C G A A C G T A G C T G A C T C T G A G T C A T A G C A G C T T C A G G T C A A T G C C A G T A G T C T A C G
A C G T A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:KCAKTTAACTGMCTCS-
-CGACCAACTGCCATGC
 C A G T G A T C T C G A A C G T A G C T G A C T C T G A G T C A T A G C A G C T T C A G G T C A A T G C C A G T A G T C T A C G A C G T
A C G T A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:KCAKTTAACTGMCTCS-
NTNNTTAAGTGGNTNAN
 C A G T G A T C T C G A A C G T A G C T G A C T C T G A G T C A T A G C A G C T T C A G G T C A A T G C C A G T A G T C T A C G A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G