Information for 5-GKMCTTTYMWGRG (Motif 12)

C A T G A C G T T G A C A G T C A C G T A C G T A C G T A G T C G T C A C G A T A C T G C T G A A C T G
Reverse Opposite:
A G T C A G C T T G A C C G T A A C G T C T A G C G T A C G T A C G T A C T A G A C T G G T C A G T A C
p-value:1e-7
log p-value:-1.658e+01
Information Content per bp:1.806
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif11.76%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.5 +/- 3.5bp
Average Position of motif in Background36.6 +/- 13.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:GKMCTTTYMWGRG-
----TTTTATKRGG
 C A T G A C G T T G A C A G T C A C G T A C G T A C G T A G T C G T C A C G A T A C T G C T G A A C T G A C G T
A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GKMCTTTYMWGRG-
----TTTTATTRGN
 C A T G A C G T T G A C A G T C A C G T A C G T A C G T A G T C G T C A C G A T A C T G C T G A A C T G A C G T
A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GKMCTTTYMWGRG-
---NTTTTACGAGN
 C A T G A C G T T G A C A G T C A C G T A C G T A C G T A G T C G T C A C G A T A C T G C T G A A C T G A C G T
A C G T A C G T A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

PH0068.1_Hoxc13/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GKMCTTTYMWGRG----
-NAATTTTACGAGNTNN
 C A T G A C G T T G A C A G T C A C G T A C G T A C G T A G T C G T C A C G A T A C T G C T G A A C T G A C G T A C G T A C G T A C G T
A C G T G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

HOXD13/MA0909.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GKMCTTTYMWGRG
---NTTTTATTGG
 C A T G A C G T T G A C A G T C A C G T A C G T A C G T A G T C G T C A C G A T A C T G C T G A A C T G
A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

TATA-Box(TBP)/Promoter/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GKMCTTTYMWGRG-
--CCTTTTATAGNC
 C A T G A C G T T G A C A G T C A C G T A C G T A C G T A G T C G T C A C G A T A C T G C T G A A C T G A C G T
A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

PH0048.1_Hoxa13/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GKMCTTTYMWGRG----
-ANATTTTACGAGNNNN
 C A T G A C G T T G A C A G T C A C G T A C G T A C G T A G T C G T C A C G A T A C T G C T G A A C T G A C G T A C G T A C G T A C G T
A C G T G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GKMCTTTYMWGRG
NNATTGGACTTTNGNN--
 A C G T A C G T A C G T A C G T A C G T C A T G A C G T T G A C A G T C A C G T A C G T A C G T A G T C G T C A C G A T A C T G C T G A A C T G
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GKMCTTTYMWGRG
---NTTTTATTGG
 C A T G A C G T T G A C A G T C A C G T A C G T A C G T A G T C G T C A C G A T A C T G C T G A A C T G
A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

REL/MA0101.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GKMCTTTYMWGRG
GGGGATTTCC----
 A C G T C A T G A C G T T G A C A G T C A C G T A C G T A C G T A G T C G T C A C G A T A C T G C T G A A C T G
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T A C G T