Information for 6-CACGCTHCGGTGTGCT (Motif 10)

T A G C T C G A G T A C A C T G A T G C A G C T G T C A A G T C C A T G T A C G C A G T T A C G C G A T T A C G T A G C A C G T
Reverse Opposite:
T G C A A T C G A T G C C G T A A G T C G T C A A T G C G A T C T C A G C A G T T C G A T A C G T G A C C A T G A G C T A T C G
p-value:1e-7
log p-value:-1.780e+01
Information Content per bp:1.659
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif17.65%
Number of Background Sequences with motif14.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets35.0 +/- 23.8bp
Average Position of motif in Background59.1 +/- 38.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC1/MA0696.1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CACGCTHCGGTGTGCT
GACCCCCCGCTGTG--
 T A G C T C G A G T A C A C T G A T G C A G C T G T C A A G T C C A T G T A C G C A G T T A C G C G A T T A C G T A G C A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T

PAX5/MA0014.2/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CACGCTHCGGTGTGCT-
GTCACGCTTGGCTGCNCNN
 A C G T A C G T T A G C T C G A G T A C A C T G A T G C A G C T G T C A A G T C C A T G T A C G C A G T T A C G C G A T T A C G T A G C A C G T A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

ZIC3/MA0697.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CACGCTHCGGTGTGCT
GACCCCCCGCTGCGC-
 T A G C T C G A G T A C A C T G A T G C A G C T G T C A A G T C C A T G T A C G C A G T T A C G C G A T T A C G T A G C A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CACGCTHCGGTGTGCT
NGTCACGCTTGGCTGC---
 A C G T A C G T A C G T T A G C T C G A G T A C A C T G A T G C A G C T G T C A A G T C C A T G T A C G C A G T T A C G C G A T T A C G T A G C A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CACGCTHCGGTGTGCT
GACCCCCCGCTGTGC-
 T A G C T C G A G T A C A C T G A T G C A G C T G T C A A G T C C A T G T A C G C A G T T A C G C G A T T A C G T A G C A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CACGCTHCGGTGTGCT
GGCCYCCTGCTGDGH-
 T A G C T C G A G T A C A C T G A T G C A G C T G T C A A G T C C A T G T A C G C A G T T A C G C G A T T A C G T A G C A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.51
Offset:8
Orientation:forward strand
Alignment:CACGCTHCGGTGTGCT--
--------GCTGTGGTTT
 T A G C T C G A G T A C A C T G A T G C A G C T G T C A A G T C C A T G T A C G C A G T T A C G C G A T T A C G T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CACGCTHCGGTGTGCT
-----CCTGCTGAGH-
 T A G C T C G A G T A C A C T G A T G C A G C T G T C A A G T C C A T G T A C G C A G T T A C G C G A T T A C G T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

REST/MA0138.2/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CACGCTHCGGTGTGCT---
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T T A G C T C G A G T A C A C T G A T G C A G C T G T C A A G T C C A T G T A C G C A G T T A C G C G A T T A C G T A G C A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CACGCTHCGGTGTGCT-
-----NTGGGTGTGGCC
 T A G C T C G A G T A C A C T G A T G C A G C T G T C A A G T C C A T G T A C G C A G T T A C G C G A T T A C G T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C