p-value: | 1e-3 |
log p-value: | -7.569e+00 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 1.0 |
Percentage of Target Sequences with motif | 4.00% |
Number of Background Sequences with motif | 0.6 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 96.0 +/- 0.0bp |
Average Position of motif in Background | 66.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0152.1_Pou6f1_2/Jaspar
Match Rank: | 1 |
Score: | 0.84 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---ACCTAATTAT---- GCAACCTCATTATNNNN |
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PH0151.1_Pou6f1_1/Jaspar
Match Rank: | 2 |
Score: | 0.82 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---ACCTAATTAT---- NNNACCTCATTATCNTN |
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POU6F2/MA0793.1/Jaspar
Match Rank: | 3 |
Score: | 0.82 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ACCTAATTAT AGCTCATTAT |
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Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer
Match Rank: | 4 |
Score: | 0.82 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ACCTAATTAT -NCTAATTA- |
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VSX2/MA0726.1/Jaspar
Match Rank: | 5 |
Score: | 0.81 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ACCTAATTAT --CTAATTAG |
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PH0143.1_Pou2f1/Jaspar
Match Rank: | 6 |
Score: | 0.81 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -ACCTAATTAT----- TACTTAATTAATNNAN |
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VSX1/MA0725.1/Jaspar
Match Rank: | 7 |
Score: | 0.81 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ACCTAATTAT --CTAATTAT |
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LBX1/MA0618.1/Jaspar
Match Rank: | 8 |
Score: | 0.79 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ACCTAATTAT --CTAATTAA |
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Dlx1/MA0879.1/Jaspar
Match Rank: | 9 |
Score: | 0.79 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ACCTAATTAT- -CCTAATTATC |
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LHX2/MA0700.1/Jaspar
Match Rank: | 10 |
Score: | 0.78 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ACCTAATTAT- -ACTAATTAAC |
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