Information for 17-CAAAGAGDCAGGA (Motif 35)

A G T C C G T A T C G A C T G A A C T G C T G A A C T G C A G T A T G C C G T A A C T G A T C G T C G A
Reverse Opposite:
A G C T A T G C A G T C A C G T A T C G G C T A A G T C A G C T A G T C G A C T A G C T A C G T A C T G
p-value:1e-5
log p-value:-1.284e+01
Information Content per bp:1.786
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif12.00%
Number of Background Sequences with motif51.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets61.3 +/- 19.7bp
Average Position of motif in Background50.4 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CAAAGAGDCAGGA
---TGAGTCAGCA
 A G T C C G T A T C G A C T G A A C T G C T G A A C T G C A G T A T G C C G T A A C T G A T C G T C G A
A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

SPIC/MA0687.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAAAGAGDCAGGA
AAAAAGAGGAAGTA
 A C G T A G T C C G T A T C G A C T G A A C T G C T G A A C T G C A G T A T G C C G T A A C T G A T C G T C G A
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAAAGAGDCAGGA
ACAAAG--------
 A C G T A G T C C G T A T C G A C T G A A C T G C T G A A C T G C A G T A T G C C G T A A C T G A T C G T C G A
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CAAAGAGDCAGGA
VRRACAAWGG-------
 A C G T A C G T A C G T A C G T A G T C C G T A T C G A C T G A A C T G C T G A A C T G C A G T A T G C C G T A A C T G A T C G T C G A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAAAGAGDCAGGA-
AGAAAGTGAAAGTGA
 A C G T A G T C C G T A T C G A C T G A A C T G C T G A A C T G C A G T A T G C C G T A A C T G A T C G T C G A A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CAAAGAGDCAGGA
GGAACAAAGR-------
 A C G T A C G T A C G T A C G T A G T C C G T A T C G A C T G A A C T G C T G A A C T G C A G T A T G C C G T A A C T G A T C G T C G A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CAAAGAGDCAGGA
GAAAGTGAAAGT-
 A G T C C G T A T C G A C T G A A C T G C T G A A C T G C A G T A T G C C G T A A C T G A T C G T C G A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:8
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CAAAGAGDCAGGA
GTAGGTCACTGGGTCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A T C G A C T G A A C T G C T G A A C T G C A G T A T G C C G T A A C T G A T C G T C G A
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A A C G T A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAAAGAGDCAGGA
AAAAAGCGGAAGTA
 A C G T A G T C C G T A T C G A C T G A A C T G C T G A A C T G C A G T A T G C C G T A A C T G A T C G T C G A
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.53
Offset:-7
Orientation:forward strand
Alignment:-------CAAAGAGDCAGGA
AGAAGAACAAAGGACTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A T C G A C T G A A C T G C T G A A C T G C A G T A T G C C G T A A C T G A T C G T C G A
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T