Information for 15-STCWAAMARTAYTTAY (Motif 22)

A T G C A C G T A T G C C G T A C G T A C G T A G T C A C G T A C T G A A C G T C T G A G A T C C G A T C G A T G C T A A G C T
Reverse Opposite:
C T G A C G A T C G T A C G T A C T A G A G C T C G T A A G C T A C G T C A G T C G A T G C A T G C A T A T C G C G T A A T C G
p-value:1e-6
log p-value:-1.587e+01
Information Content per bp:1.807
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif8.00%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 7.0bp
Average Position of motif in Background32.1 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0072.1_Hoxc8/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:STCWAAMARTAYTTAY-----
-----ACNNTAATTACNNCAN
 A T G C A C G T A T G C C G T A C G T A C G T A G T C A C G T A C T G A A C G T C T G A G A T C C G A T C G A T G C T A A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A G T A C C T A G C A G T G A C T G T C A G C T A C A G T C A G T C T G A G T A C A G T C G A T C G T A C C G T A T G C A

PH0062.1_Hoxb7/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:STCWAAMARTAYTTAY---
---TNNCATTAATTANTNC
 A T G C A C G T A T G C C G T A C G T A C G T A G T C A C G T A C T G A A C G T C T G A G A T C C G A T C G A T G C T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C G A T T A C G G T A C T G C A A C G T G A C T G T C A G C T A C G A T C A G T C T G A T G A C A C G T T C G A T A G C

PH0008.1_Barx2/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:STCWAAMARTAYTTAY---
---NANAANTAATTANTTA
 A T G C A C G T A T G C C G T A C G T A C G T A G T C A C G T A C T G A A C G T C T G A G A T C C G A T C G A T G C T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T G A G A C T G T C A T C G A A G T C G A C T G T C A G C T A C A G T C A G T C T G A T G A C A G C T C G A T C G T A

PH0022.1_Dlx3/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:STCWAAMARTAYTTAY----
---TCGCGATAATTACCGAC
 A T G C A C G T A T G C C G T A C G T A C G T A G T C A C G T A C T G A A C G T C T G A G A T C C G A T C G A T G C T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C

PB0116.1_Elf3_2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-STCWAAMARTAYTTAY
GTTCAAAAAAAAAATTC
 A C G T A T G C A C G T A T G C C G T A C G T A C G T A G T C A C G T A C T G A A C G T C T G A G A T C C G A T C G A T G C T A A G C T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

MEF2A/MA0052.3/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:STCWAAMARTAYTTAY
-TCTAAAAATAGA---
 A T G C A C G T A T G C C G T A C G T A C G T A G T C A C G T A C T G A A C G T C T G A G A T C C G A T C G A T G C T A A G C T
A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T A C G T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:STCWAAMARTAYTTAY---
--TACTAAGTACTTAAATG
 A T G C A C G T A T G C C G T A C G T A C G T A G T C A C G T A C T G A A C G T C T G A G A T C C G A T C G A T G C T A A G C T A C G T A C G T A C G T
A C G T A C G T C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:STCWAAMARTAYTTAY
---NAACAAT------
 A T G C A C G T A T G C C G T A C G T A C G T A G T C A C G T A C T G A A C G T C T G A G A T C C G A T C G A T G C T A A G C T
A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0053.1_Hoxa6/Jaspar

Match Rank:9
Score:0.57
Offset:5
Orientation:forward strand
Alignment:STCWAAMARTAYTTAY-----
-----AAGGTAATTACCTAAT
 A T G C A C G T A T G C C G T A C G T A C G T A G T C A C G T A C T G A A C G T C T G A G A T C C G A T C G A T G C T A A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-STCWAAMARTAYTTAY
TTAAGAACAATAAATT-
 A C G T A T G C A C G T A T G C C G T A C G T A C G T A G T C A C G T A C T G A A C G T C T G A G A T C C G A T C G A T G C T A A G C T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T A C G T