Information for 11-CCDGCTCAAACAAGAC (Motif 16)

G T A C A G T C C G T A A T C G A G T C C G A T G T A C T C G A T C G A G T C A A T G C G T C A G T C A A T C G C T G A A T G C
Reverse Opposite:
A T C G G A C T A T G C A C G T A C G T A T C G A C G T A G C T A G C T A C T G C G T A C T A G A T G C G A C T C T A G A C T G
p-value:1e-7
log p-value:-1.748e+01
Information Content per bp:1.685
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif16.00%
Number of Background Sequences with motif58.4
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets65.2 +/- 30.9bp
Average Position of motif in Background50.8 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCDGCTCAAACAAGAC
NAAACCGGTTNNAACCGGTT
 A C G T A C G T A C G T A C G T G T A C A G T C C G T A A T C G A G T C C G A T G T A C T C G A T C G A G T C A A T G C G T C A G T C A A T C G C T G A A T G C
T G A C T C G A C T G A C T G A A T G C G A T C C T A G T A C G G A C T G A C T G A T C T C G A C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CCDGCTCAAACAAGAC------
-----CAAATCCAGACATCACA
 G T A C A G T C C G T A A T C G A G T C C G A T G T A C T C G A T C G A G T C A A T G C G T C A G T C A A T C G C T G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.53
Offset:10
Orientation:reverse strand
Alignment:CCDGCTCAAACAAGAC--
----------CCAGACAG
 G T A C A G T C C G T A A T C G A G T C C G A T G T A C T C G A T C G A G T C A A T G C G T C A G T C A A T C G C T G A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.51
Offset:10
Orientation:reverse strand
Alignment:CCDGCTCAAACAAGAC----
----------CCAGACRSVB
 G T A C A G T C C G T A A T C G A G T C C G A T G T A C T C G A T C G A G T C A A T G C G T C A G T C A A T C G C T G A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:5
Score:0.47
Offset:-4
Orientation:reverse strand
Alignment:----CCDGCTCAAACAAGAC
NGGGCATGTCTGGGCATGTT
 A C G T A C G T A C G T A C G T G T A C A G T C C G T A A T C G A G T C C G A T G T A C T C G A T C G A G T C A A T G C G T C A G T C A A T C G C T G A A T G C
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:6
Score:0.47
Offset:-4
Orientation:reverse strand
Alignment:----CCDGCTCAAACAAGAC
NGGGCATGTCTGGGCATGTT
 A C G T A C G T A C G T A C G T G T A C A G T C C G T A A T C G A G T C C G A T G T A C T C G A T C G A G T C A A T G C G T C A G T C A A T C G C T G A A T G C
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.47
Offset:7
Orientation:reverse strand
Alignment:CCDGCTCAAACAAGAC-
-------ATGCCAGACN
 G T A C A G T C C G T A A T C G A G T C C G A T G T A C T C G A T C G A G T C A A T G C G T C A G T C A A T C G C T G A A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.46
Offset:5
Orientation:reverse strand
Alignment:CCDGCTCAAACAAGAC
-----BCAGACWA---
 G T A C A G T C C G T A A T C G A G T C C G A T G T A C T C G A T C G A G T C A A T G C G T C A G T C A A T C G C T G A A T G C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.46
Offset:6
Orientation:forward strand
Alignment:CCDGCTCAAACAAGAC
------NAAACCACAG
 G T A C A G T C C G T A A T C G A G T C C G A T G T A C T C G A T C G A G T C A A T G C G T C A G T C A A T C G C T G A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer

Match Rank:10
Score:0.46
Offset:-4
Orientation:forward strand
Alignment:----CCDGCTCAAACAAGAC
NNNGCATGTCNNGACATGCN
 A C G T A C G T A C G T A C G T G T A C A G T C C G T A A T C G A G T C C G A T G T A C T C G A T C G A G T C A A T G C G T C A G T C A A T C G C T G A A T G C
G T C A T C G A C T A G C T A G A G T C G T C A C G A T C T A G G A C T G A T C G A T C T C A G C T A G C T G A A G T C G C T A C A G T T C A G G A T C G A T C