Information for 3-CAGGGAGGCMTGMARA (Motif 3)

A T G C G C T A A C T G A C T G T A C G G T C A A C T G C T A G G A T C G T C A C A G T C T A G G T A C C G T A C T A G T G C A
Reverse Opposite:
A C G T A G T C A C G T A C T G A G T C G T C A A C G T C A T G A G T C A G T C A C G T A T G C A G T C A G T C C G A T A T C G
p-value:1e-9
log p-value:-2.118e+01
Information Content per bp:1.722
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif6.82%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 17.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGGGAGGCMTGMARA
GGAAGGAAGGAAGGAAGG
 A C G T A C G T A T G C G C T A A C T G A C T G T A C G G T C A A C T G C T A G G A T C G T C A C A G T C T A G G T A C C G T A C T A G T G C A
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGAGGCMTGMARA
SCAGYCADGCATGAC--
 A C G T A T G C G C T A A C T G A C T G T A C G G T C A A C T G C T A G G A T C G T C A C A G T C T A G G T A C C G T A C T A G T G C A
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAGGGAGGCMTGMARA
--GGGAGGACNG----
 A T G C G C T A A C T G A C T G T A C G G T C A A C T G C T A G G A T C G T C A C A G T C T A G G T A C C G T A C T A G T G C A
A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAGGGAGGCMTGMARA
ACAGGAAGTG-------
 A C G T A T G C G C T A A C T G A C T G T A C G G T C A A C T G C T A G G A T C G T C A C A G T C T A G G T A C C G T A C T A G T G C A
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAGGGAGGCMTGMARA
AACAGGAAGT--------
 A C G T A C G T A T G C G C T A A C T G A C T G T A C G G T C A A C T G C T A G G A T C G T C A C A G T C T A G G T A C C G T A C T A G T G C A
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CAGGGAGGCMTGMARA
AACCGGAAGT--------
 A C G T A C G T A T G C G C T A A C T G A C T G T A C G G T C A A C T G C T A G G A T C G T C A C A G T C T A G G T A C C G T A C T A G T G C A
T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CAGGGAGGCMTGMARA
ACCGGAAG---------
 A C G T A T G C G C T A A C T G A C T G T A C G G T C A A C T G C T A G G A T C G T C A C A G T C T A G G T A C C G T A C T A G T G C A
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CAGGGAGGCMTGMARA
ANCAGGAAGT--------
 A C G T A C G T A T G C G C T A A C T G A C T G T A C G G T C A A C T G C T A G G A T C G T C A C A G T C T A G G T A C C G T A C T A G T G C A
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CAGGGAGGCMTGMARA
AVCAGGAAGT--------
 A C G T A C G T A T G C G C T A A C T G A C T G T A C G G T C A A C T G C T A G G A T C G T C A C A G T C T A G G T A C C G T A C T A G T G C A
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CAGGGAGGCMTGMARA
-TGGCAGNCTGCCAG-
 A T G C G C T A A C T G A C T G T A C G G T C A A C T G C T A G G A T C G T C A C A G T C T A G G T A C C G T A C T A G T G C A
A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T