Information for 2-TRYCTKSTTKCCT (Motif 8)

A C G T C T A G A G T C A G T C A C G T A C G T A T C G A C G T A C G T C A G T A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G G T C A C G T A C G T A A T G C G T C A G T C A A C T G C T A G A G T C C G T A
p-value:1e-7
log p-value:-1.677e+01
Information Content per bp:1.847
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif6.35%
Number of Background Sequences with motif27.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets57.0 +/- 25.4bp
Average Position of motif in Background47.0 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TRYCTKSTTKCCT-
---NNACTTGCCTT
 A C G T C T A G A G T C A G T C A C G T A C G T A T C G A C G T A C G T C A G T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.60
Offset:6
Orientation:forward strand
Alignment:TRYCTKSTTKCCT---
------ATTTCCTGTN
 A C G T C T A G A G T C A G T C A C G T A C G T A T C G A C G T A C G T C A G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TRYCTKSTTKCCT---
CCTTCCTTCCTTCCTTCC
 A C G T A C G T A C G T C T A G A G T C A G T C A C G T A C G T A T C G A C G T A C G T C A G T A G T C A G T C A C G T A C G T A C G T A C G T
A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TRYCTKSTTKCCT
GKMTCADRTTWC--
 A C G T A C G T C T A G A G T C A G T C A C G T A C G T A T C G A C G T A C G T C A G T A G T C A G T C A C G T
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:TRYCTKSTTKCCT---
------ATTTCCTGTN
 A C G T C T A G A G T C A G T C A C G T A C G T A T C G A C G T A C G T C A G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TRYCTKSTTKCCT---
----NNAYTTCCTGHN
 A C G T C T A G A G T C A G T C A C G T A C G T A T C G A C G T A C G T C A G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TRYCTKSTTKCCT
GKVTCADRTTWC--
 A C G T A C G T C T A G A G T C A G T C A C G T A C G T A T C G A C G T A C G T C A G T A G T C A G T C A C G T
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TRYCTKSTTKCCT----
----TTACTTCCTNGTN
 A C G T C T A G A G T C A G T C A C G T A C G T A T C G A C G T A C G T C A G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A A G T C C G A T A C G T G A T C A G T C A C G T A C G T C A T G G C A T G C A T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TRYCTKSTTKCCT
CAKCTGKYCYYTTYCCC
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C A G T C A C G T A C G T A T C G A C G T A C G T C A G T A G T C A G T C A C G T
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C

SPIB/MA0081.1/Jaspar

Match Rank:10
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:TRYCTKSTTKCCT--
--------TTCCTCT
 A C G T C T A G A G T C A G T C A C G T A C G T A T C G A C G T A C G T C A G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T