Information for 1-CAGWGCTCATGAG (Motif 5)

A T G C C G T A A T C G C G T A A C T G G A T C G C A T A G T C C G T A C A G T A C T G G T C A C T A G
Reverse Opposite:
A G T C A C G T G T A C G T C A G C A T A C T G C G T A C T A G A G T C C G A T A T G C C G A T A T C G
p-value:1e-7
log p-value:-1.827e+01
Information Content per bp:1.674
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif12.70%
Number of Background Sequences with motif331.9
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets48.8 +/- 23.2bp
Average Position of motif in Background48.7 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CAGWGCTCATGAG
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G T A A C T G G A T C G C A T A G T C C G T A C A G T A C T G G T C A C T A G
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PH0058.1_Hoxb3/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAGWGCTCATGAG-----
-TGAGCTAATTAGTTGGA
 A T G C C G T A A T C G C G T A A C T G G A T C G C A T A G T C C G T A C A G T A C T G G T C A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T C A G T G C A T A C G A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A G C T C A G T T C A G C T A G C G T A

PH0098.1_Lhx8/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAGWGCTCATGAG----
CACCGCTAATTAGNNGN
 A T G C C G T A A T C G C G T A A C T G G A T C G C A T A G T C C G T A C A G T A C T G G T C A C T A G A C G T A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAGWGCTCATGAG
-WATGCAAATGAG
 A T G C C G T A A T C G C G T A A C T G G A T C G C A T A G T C C G T A C A G T A C T G G T C A C T A G
A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

NRF(NRF)/Promoter/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CAGWGCTCATGAG-
--GTGCGCATGCGC
 A T G C C G T A A T C G C G T A A C T G G A T C G C A T A G T C C G T A C A G T A C T G G T C A C T A G A C G T
A C G T A C G T A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

PB0026.1_Gm397_1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CAGWGCTCATGAG
NNGTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G T A A C T G G A T C G C A T A G T C C G T A C A G T A C T G G T C A C T A G
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PH0155.1_Prrx2/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAGWGCTCATGAG-----
-AAAGCTAATTAGCGAAA
 A T G C C G T A A T C G C G T A A C T G G A T C G C A T A G T C C G T A C A G T A C T G G T C A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T C G T A T G C A G T C A T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A T G C T G A C G T A C T G A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------CAGWGCTCATGAG
NNNANTGCAGTGCNNTT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G T A A C T G G A T C G C A T A G T C C G T A C A G T A C T G G T C A C T A G
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CAGWGCTCATGAG
NTNTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G T A A C T G G A T C G C A T A G T C C G T A C A G T A C T G G T C A C T A G
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PH0097.1_Lhx6_2/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CAGWGCTCATGAG----
NNNCGCTAATTAGNNGA
 A T G C C G T A A T C G C G T A A C T G G A T C G C A T A G T C C G T A C A G T A C T G G T C A C T A G A C G T A C G T A C G T A C G T
T G C A G C T A G A T C G T A C T C A G G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G C T C A T G A C T G C G T A