Information for 3-AATGCAWRTA (Motif 10)

G T C A C G T A C G A T A C T G A G T C C G T A C G T A C T G A A C G T C G T A
Reverse Opposite:
C G A T C G T A A G C T C G A T A C G T A C T G G T A C C G T A A C G T A C G T
p-value:1e-6
log p-value:-1.495e+01
Information Content per bp:1.813
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif9.52%
Number of Background Sequences with motif209.1
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets58.0 +/- 34.3bp
Average Position of motif in Background50.9 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-AATGCAWRTA--
ATATGCAAATNNN
 A C G T G T C A C G T A C G A T A C T G A G T C C G T A C G T A C T G A A C G T C G T A A C G T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-AATGCAWRTA
TTATGCAAAT-
 A C G T G T C A C G T A C G A T A C T G A G T C C G T A C G T A C T G A A C G T C G T A
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-AATGCAWRTA
ATATGCAAAT-
 A C G T G T C A C G T A C G A T A C T G A G T C C G T A C G T A C T G A A C G T C G T A
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:4
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---AATGCAWRTA---
TTGTATGCAAATTAGA
 A C G T A C G T A C G T G T C A C G T A C G A T A C T G A G T C C G T A C G T A C T G A A C G T C G T A A C G T A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

Pou2f3/MA0627.1/Jaspar

Match Rank:5
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---AATGCAWRTA---
TTGTATGCAAATTAGA
 A C G T A C G T A C G T G T C A C G T A C G A T A C T G A G T C C G T A C G T A C T G A A C G T C G T A A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:6
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---AATGCAWRTA---
TTGTATGCAAATTAGA
 A C G T A C G T A C G T G T C A C G T A C G A T A C T G A G T C C G T A C G T A C T G A A C G T C G T A A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AATGCAWRTA
TATGCAAAT-
 G T C A C G T A C G A T A C T G A G T C C G T A C G T A C T G A A C G T C G T A
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AATGCAWRTA--
WATGCAAATGAG
 G T C A C G T A C G A T A C T G A G T C C G T A C G T A C T G A A C G T C G T A A C G T A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AATGCAWRTA-
-ATGMATATDC
 G T C A C G T A C G A T A C T G A G T C C G T A C G T A C T G A A C G T C G T A A C G T
A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

POU3F4/MA0789.1/Jaspar

Match Rank:10
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AATGCAWRTA
TATGCAAAT-
 G T C A C G T A C G A T A C T G A G T C C G T A C G T A C T G A A C G T C G T A
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T