Information for 2-GTACGCACCTTCATCC (Motif 3)

A C T G C A G T T G C A T A G C T C A G A G T C C T G A A T G C A G T C A C G T A C G T A T G C C T G A A C G T A T G C A G T C
Reverse Opposite:
C T A G A T C G G T C A A G C T A T C G T G C A G T C A C T A G A T C G A G C T T A C G A G T C A C T G A C G T G C T A G T A C
p-value:1e-9
log p-value:-2.192e+01
Information Content per bp:1.649
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif17.24%
Number of Background Sequences with motif58.5
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets54.6 +/- 21.7bp
Average Position of motif in Background47.7 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM1/MA0646.1/Jaspar

Match Rank:1
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GTACGCACCTTCATCC
----GTACCCGCATN-
 A C T G C A G T T G C A T A G C T C A G A G T C C T G A A T G C A G T C A C G T A C G T A T G C C T G A A C G T A T G C A G T C
A C G T A C G T A C G T A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GTACGCACCTTCATCC
--SNGCACCTGCHS--
 A C T G C A G T T G C A T A G C T C A G A G T C C T G A A T G C A G T C A C G T A C G T A T G C C T G A A C G T A T G C A G T C
A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:3
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GTACGCACCTTCATCC-------
-------CCGTCTTCCCCCTCAC
 A C T G C A G T T G C A T A G C T C A G A G T C C T G A A T G C A G T C A C G T A C G T A T G C C T G A A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

TCF4/MA0830.1/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GTACGCACCTTCATCC
---CGCACCTGCT---
 A C T G C A G T T G C A T A G C T C A G A G T C C T G A A T G C A G T C A C G T A C G T A T G C C T G A A C G T A T G C A G T C
A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:5
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GTACGCACCTTCATCC
-----TACCCGCATN-
 A C T G C A G T T G C A T A G C T C A G A G T C C T G A A T G C A G T C A C G T A C G T A T G C C T G A A C G T A T G C A G T C
A C G T A C G T A C G T A C G T A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GTACGCACCTTCATCC--
--TCGTACCCGCATCATT
 A C T G C A G T T G C A T A G C T C A G A G T C C T G A A T G C A G T C A C G T A C G T A T G C C T G A A C G T A T G C A G T C A C G T A C G T
A C G T A C G T G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GTACGCACCTTCATCC
---AACACCTGCT---
 A C T G C A G T T G C A T A G C T C A G A G T C C T G A A T G C A G T C A C G T A C G T A T G C C T G A A C G T A T G C A G T C
A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GTACGCACCTTCATCC
---CGCAGCTGCG---
 A C T G C A G T T G C A T A G C T C A G A G T C C T G A A T G C A G T C A C G T A C G T A T G C C T G A A C G T A T G C A G T C
A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTACGCACCTTCATCC
ADGGYAGYAGCATCT---
 A C G T A C G T A C T G C A G T T G C A T A G C T C A G A G T C C T G A A T G C A G T C A C G T A C G T A T G C C T G A A C G T A T G C A G T C
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GTACGCACCTTCATCC
----NCACCTGTN---
 A C T G C A G T T G C A T A G C T C A G A G T C C T G A A T G C A G T C A C G T A C G T A T G C C T G A A C G T A T G C A G T C
A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T