Information for 3-GCACAAGTGC (Motif 12)

A C T G A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A C G T A C G T A C T G A C G T A C T G A G T C
p-value:1e-2
log p-value:-6.717e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.45%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets22.0 +/- 0.0bp
Average Position of motif in Background51.3 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCACAAGTGC
-NTCAAGTGG
 A C T G A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C T G A G T C
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCACAAGTGC-
-NTCAAGTGGN
 A C T G A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C T G A G T C A C G T
A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GCACAAGTGC-----
ATCCACAGGTGCGAAAA
 A C G T A C G T A C T G A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

Npas2/MA0626.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GCACAAGTGC-
-NACACGTGCN
 A C T G A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C T G A G T C A C G T
A C G T A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

Mlxip/MA0622.1/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCACAAGTGC
--ACACGTGC
 A C T G A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C T G A G T C
A C G T A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C

Hes2/MA0616.1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCACAAGTGC
TAACGACACGTGC
 A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C T G A G T C
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCACAAGTGC
-AACAGGTGT
 A C T G A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C T G A G T C
A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

PB0200.1_Zfp187_2/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GCACAAGTGC--
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCACAAGTGC-
-CTYRAGTGSY
 A C T G A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C T G A G T C A C G T
A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

HEY1/MA0823.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCACAAGTGC-
-GACACGTGCC
 A C T G A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C T G A G T C A C G T
A C G T T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C