Information for 1-TTTGAGTACG (Motif 10)

A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T C G T A A G T C A C G T A G T C C G T A C G T A C G T A
p-value:1e-3
log p-value:-7.410e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.45%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 0.0bp
Average Position of motif in Background54.5 +/- 8.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0117.1_Nkx3-1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTTGAGTACG-----
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PB0094.1_Zfp128_1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTTGAGTACG-------
TTNGGGTACGCCNNANN
 A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

PH0116.1_Nkx2-9/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTTGAGTACG-----
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTTGAGTACG
TTTGAAACCG
 A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A G T C A C T G
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTTGAGTACG-
-TTAAGTGCTT
 A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A G T C A C T G A C G T
A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

PH0112.1_Nkx2-3/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTTGAGTACG-----
CTTTAAGTACTTAATG
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTGAGTACG------
TTCNAAGTACTTNNNNN
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

LIN54/MA0619.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTTGAGTACG
ATTTGAATT--
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A G T C A C T G
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTTGAGTACG
CTYRAGTGSY
 A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A G T C A C T G
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

PB0016.1_Foxj1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTTGAGTACG--
NNNNTTTGTTTACNNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A G T C A C T G A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T