Information for 23-TTTHRAGTGAACT (Motif 50)

C G A T A G C T C G A T G C A T C T G A C G T A T C A G A C G T C T A G G T C A C G T A A T G C C G A T
Reverse Opposite:
C G T A T A C G C G A T A C G T A G T C T C G A A G T C C G A T G A C T C G T A C G T A C T G A C G T A
p-value:1e-2
log p-value:-6.771e+00
Information Content per bp:1.597
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif2578.8
Percentage of Background Sequences with motif5.69%
Average Position of motif in Targets57.4 +/- 25.7bp
Average Position of motif in Background50.3 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat6/MA0520.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTTHRAGTGAACT
CATTTCCTGAGAAAT
 A C G T A C G T C G A T A G C T C G A T G C A T C T G A C G T A T C A G A C G T C T A G G T C A C G T A A T G C C G A T
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTTHRAGTGAACT
---AAAGTAAACA
 C G A T A G C T C G A T G C A T C T G A C G T A T C A G A C G T C T A G G T C A C G T A A T G C C G A T
A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTTHRAGTGAACT
---AAAGTAAACA
 C G A T A G C T C G A T G C A T C T G A C G T A T C A G A C G T C T A G G T C A C G T A A T G C C G A T
A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTTHRAGTGAACT
-TTCTNNAGAANT
 C G A T A G C T C G A T G C A T C T G A C G T A T C A G A C G T C T A G G T C A C G T A A T G C C G A T
A C G T A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T

PB0005.1_Bbx_1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTTHRAGTGAACT-
NANTTCATTGAATTA
 A C G T C G A T A G C T C G A T G C A T C T G A C G T A T C A G A C G T C T A G G T C A C G T A A T G C C G A T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTTHRAGTGAACT----
--CAAAGTAAACANNNN
 C G A T A G C T C G A T G C A T C T G A C G T A T C A G A C G T C T A G G T C A C G T A A T G C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTTHRAGTGAACT
---WAAGTAAAYA
 C G A T A G C T C G A T G C A T C T G A C G T A T C A G A C G T C T A G G T C A C G T A A T G C C G A T
A C G T A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTTHRAGTGAACT--
---TATGTAAACANG
 C G A T A G C T C G A T G C A T C T G A C G T A T C A G A C G T C T A G G T C A C G T A A T G C C G A T A C G T A C G T
A C G T A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TTTHRAGTGAACT--
---TAAGTAAACAAA
 C G A T A G C T C G A T G C A T C T G A C G T A T C A G A C G T C T A G G T C A C G T A A T G C C G A T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

PB0001.1_Arid3a_1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TTTHRAGTGAACT-
NNNTTTTAATTAANNNN
 A C G T A C G T A C G T C G A T A G C T C G A T G C A T C T G A C G T A T C A G A C G T C T A G G T C A C G T A A T G C C G A T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C