Information for 4-KSGACCTGTTCTTRKC (Motif 5)

A C T G A T G C A T C G C G T A T A G C A G T C C G A T C A T G C A G T A C G T A G T C G C A T A G C T C T G A A C T G A G T C
Reverse Opposite:
T A C G T G A C G A C T C T G A C G T A T A C G G T C A G C T A G A T C C G T A A C T G A C T G G A C T A T G C T A C G T G A C
p-value:1e-10
log p-value:-2.419e+01
Information Content per bp:1.613
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif22.73%
Number of Background Sequences with motif47.3
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets27.6 +/- 2.1bp
Average Position of motif in Background47.1 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:KSGACCTGTTCTTRKC
-TGACCT---------
 A C T G A T G C A T C G C G T A T A G C A G T C C G A T C A T G C A G T A C G T A G T C G C A T A G C T C T G A A C T G A G T C
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:KSGACCTGTTCTTRKC
-----CTGTTCCTGG-
 A C T G A T G C A T C G C G T A T A G C A G T C C G A T C A T G C A G T A C G T A G T C G C A T A G C T C T G A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:KSGACCTGTTCTTRKC
-TGACCTTTNCNT---
 A C T G A T G C A T C G C G T A T A G C A G T C C G A T C A T G C A G T A C G T A G T C G C A T A G C T C T G A A C T G A G T C
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:KSGACCTGTTCTTRKC
----GCTATTTTTAGC
 A C T G A T G C A T C G C G T A T A G C A G T C C G A T C A T G C A G T A C G T A G T C G C A T A G C T C T G A A C T G A G T C
A C G T A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

MEF2B/MA0660.1/Jaspar

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:KSGACCTGTTCTTRKC
----GCTATTTATAGC
 A C T G A T G C A T C G C G T A T A G C A G T C C G A T C A T G C A G T A C G T A G T C G C A T A G C T C T G A A C T G A G T C
A C G T A C G T A C G T A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:KSGACCTGTTCTTRKC--
BTGACCTCTNNHTGACCY
 A C T G A T G C A T C G C G T A T A G C A G T C C G A T C A T G C A G T A C G T A G T C G C A T A G C T C T G A A C T G A G T C A C G T A C G T
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T

RARA(var.2)/MA0730.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:KSGACCTGTTCTTRKC--
-TGACCTTTGCATGACCT
 A C T G A T G C A T C G C G T A T A G C A G T C C G A T C A T G C A G T A C G T A G T C G C A T A G C T C T G A A C T G A G T C A C G T A C G T
A C G T G A C T T A C G T G C A T G A C G T A C A G C T A G C T G C A T T C A G T A G C C T G A A C G T C T A G T G C A T G A C G T A C A G C T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---KSGACCTGTTCTTRKC
NNNNTGACCTTTNNNN---
 A C G T A C G T A C G T A C T G A T G C A T C G C G T A T A G C A G T C C G A T C A T G C A G T A C G T A G T C G C A T A G C T C T G A A C T G A G T C
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---KSGACCTGTTCTTRKC
NNNGTGACCTTTGNNN---
 A C G T A C G T A C G T A C T G A T G C A T C G C G T A T A G C A G T C C G A T C A T G C A G T A C G T A G T C G C A T A G C T C T G A A C T G A G T C
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A A C G T A C G T A C G T

MYF6/MA0667.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:KSGACCTGTTCTTRKC
---AACAGCTGTT---
 A C T G A T G C A T C G C G T A T A G C A G T C C G A T C A T G C A G T A C G T A G T C G C A T A G C T C T G A A C T G A G T C
A C G T A C G T A C G T T C G A C T G A A T G C C G T A T C A G A G T C A G C T A C T G A G C T A G C T A C G T A C G T A C G T