Information for 23-ACAGTGGCCG (Motif 48)

C G T A A G T C C G T A A C T G A C G T A C T G A C T G A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C G T
p-value:1e-3
log p-value:-6.937e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.0 +/- 0.0bp
Average Position of motif in Background69.0 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0051.1_Osr2_1/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----ACAGTGGCCG--
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C G T A C T G A C T G A G T C A G T C A C T G A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ACAGTGGCCG--
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C G T A C T G A C T G A G T C A G T C A C T G A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

ZBTB7A/MA0750.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ACAGTGGCCG--
TCGGTGGTCGCN
 C G T A A G T C C G T A A C T G A C G T A C T G A C T G A G T C A G T C A C T G A C G T A C G T
A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACAGTGGCCG
VRAACAATGG---
 A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C G T A C T G A C T G A G T C A G T C A C T G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACAGTGGCCG-
CAGTGTGGTCGC
 A C G T C G T A A G T C C G T A A C T G A C G T A C T G A C T G A G T C A G T C A C T G A C G T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACAGTGGCCG
AACAAAGG---
 A C G T C G T A A G T C C G T A A C T G A C G T A C T G A C T G A G T C A G T C A C T G
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACAGTGGCCG
GAACAATGGN--
 A C G T A C G T C G T A A G T C C G T A A C T G A C G T A C T G A C T G A G T C A G T C A C T G
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACAGTGGCCG
RAACAATGGN--
 A C G T A C G T C G T A A G T C C G T A A C T G A C G T A C T G A C T G A G T C A G T C A C T G
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACAGTGGCCG-
NTCGGTGGTCGC
 A C G T C G T A A G T C C G T A A C T G A C G T A C T G A C T G A G T C A G T C A C T G A C G T
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACAGTGGCCG------
NAGANTGGCGGGGNGNA
 A C G T C G T A A G T C C G T A A C T G A C G T A C T G A C T G A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A