Information for 22-CTCCGTTTTC (Motif 47)

A G T C A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A C G T A A G T C A C T G A C T G C G T A A C T G
p-value:1e-3
log p-value:-6.937e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 0.0bp
Average Position of motif in Background34.5 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTCCGTTTTC
GKMTCADRTTWC
 A C G T A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A G T C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTCCGTTTTC
GCTCCG-----
 A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A G T C
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTCCGTTTTC-
NNGCACCTTTCTCC
 A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A G T C A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CTCCGTTTTC--
-----TTTTCCA
 A G T C A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTCCGTTTTC-----
CTTTGTTTACTTTTN
 A G T C A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

IRF7/MA0772.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTCCGTTTTC--
ANTTTCGCTTTCGN
 A C G T A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T
C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTCCGTTTTC
GKVTCADRTTWC
 A C G T A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A G T C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CTCCGTTTTC----
----ATTTTCCATT
 A G T C A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

PB0124.1_Gabpa_2/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTCCGTTTTC--------
--CCGTCTTCCCCCTCAC
 A G T C A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTCCGTTTTC---
---TGGTTTCAGT
 A G T C A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T