Information for 25-AGGGCCCGGCAGAGGA (Motif 44)

C G T A A C T G A C T G A C T G A G T C A G T C A G T C A C T G A C T G A G T C C G T A A C T G C G T A A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C G T A G T C A C G T A C T G A G T C A G T C A C T G A C T G A C T G A G T C A G T C A G T C A C G T
p-value:1e-3
log p-value:-7.630e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets8.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gabpa/MA0062.2/Jaspar

Match Rank:1
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AGGGCCCGGCAGAGGA
-----CCGGAAGTGGC
 C G T A A C T G A C T G A C T G A G T C A G T C A G T C A C T G A C T G A G T C C G T A A C T G C G T A A C T G A C T G C G T A
A C G T A C G T A C G T A C G T A C G T T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C

ELK4/MA0076.2/Jaspar

Match Rank:2
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AGGGCCCGGCAGAGGA
----NCCGGAAGTGG-
 C G T A A C T G A C T G A C T G A G T C A G T C A G T C A C T G A C T G A G T C C G T A A C T G C G T A A C T G A C T G C G T A
A C G T A C G T A C G T A C G T T C A G T A G C G T A C A C T G A C T G C G T A C G T A T C A G G A C T T A C G T A C G A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGGGCCCGGCAGAGGA
CAGGCCNNGGCCNN---
 A C G T C G T A A C T G A C T G A C T G A G T C A G T C A G T C A C T G A C T G A G T C C G T A A C T G C G T A A C T G A C T G C G T A
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AGGGCCCGGCAGAGGA
----CACAGCAGGGGG
 C G T A A C T G A C T G A C T G A G T C A G T C A G T C A C T G A C T G A G T C C G T A A C T G C G T A A C T G A C T G C G T A
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:AGGGCCCGGCAGAGGA--
---DCHCAGCAGGRGGCC
 C G T A A C T G A C T G A C T G A G T C A G T C A G T C A C T G A C T G A G T C C G T A A C T G C G T A A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:6
Score:0.49
Offset:0
Orientation:forward strand
Alignment:AGGGCCCGGCAGAGGA
GGGGCTYGKCTGGGA-
 C G T A A C T G A C T G A C T G A G T C A G T C A G T C A C T G A C T G A G T C C G T A A C T G C G T A A C T G A C T G C G T A
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

SPIB/MA0081.1/Jaspar

Match Rank:7
Score:0.49
Offset:10
Orientation:forward strand
Alignment:AGGGCCCGGCAGAGGA-
----------AGAGGAA
 C G T A A C T G A C T G A C T G A G T C A G T C A G T C A C T G A C T G A G T C C G T A A C T G C G T A A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--AGGGCCCGGCAGAGGA
ACATGCCCGGGCAT----
 A C G T A C G T C G T A A C T G A C T G A C T G A G T C A G T C A G T C A C T G A C T G A G T C C G T A A C T G C G T A A C T G A C T G C G T A
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T A C G T A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:AGGGCCCGGCAGAGGA
TGGGTGGGGC------
 C G T A A C T G A C T G A C T G A G T C A G T C A G T C A C T G A C T G A G T C C G T A A C T G C G T A A C T G A C T G C G T A
C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:forward strand
Alignment:AGGGCCCGGCAGAGGA
DGGGYGKGGC------
 C G T A A C T G A C T G A C T G A G T C A G T C A G T C A C T G A C T G A G T C C G T A A C T G C G T A A C T G A C T G C G T A
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T