Information for 18-AGCTCATGGTGAT (Motif 40)

C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A A G T C A G T C C G T A A C G T A C T G C G T A A C T G A G T C A C G T
p-value:1e-3
log p-value:-7.630e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets86.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR1/MA0112.3/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCATGGTGAT---
CAGGTCACCGTGACCTT
 A C G T C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGCTCATGGTGAT
AGGTCAAGGTCA-
 C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C T G C G T A A C G T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGCTCATGGTGAT
AGGTCAAGGTCA-
 C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C T G C G T A A C G T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T

Esrra/MA0592.2/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGCTCATGGTGAT
--TTCAAGGTCAT
 C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C T G C G T A A C G T
A C G T A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

ESRRB/MA0141.3/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGCTCATGGTGAT-
---TCAAGGTCATA
 C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Myc/MA0147.2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCATGGTGAT
AAGCACATGG----
 A C G T C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C T G C G T A A C G T
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCTCATGGTGAT-
AAGTTCAAGGTCAGC
 A C G T C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C T G C G T A A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGCTCATGGTGAT-
NAGGTCACNNTGACC
 A C G T C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C T G C G T A A C G T A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

MAX::MYC/MA0059.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCTCATGGTGAT
GACCACGTGGT---
 A C G T C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C T G C G T A A C G T
C T A G C T G A T A C G G T A C C G T A A G T C C T A G A G C T A C T G A C T G G A C T A C G T A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGCTCATGGTGAT-
GCAACCTCATTATNNNN
 A C G T A C G T A C G T C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C T G C G T A A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T