Information for 13-GATGTATTGG (Motif 37)

A C T G C G T A A C G T A C T G A C G T C G T A A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A A C G T C G T A A G T C C G T A A C G T A G T C
p-value:1e-3
log p-value:-7.630e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets19.0 +/- 0.0bp
Average Position of motif in Background55.9 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13/MA0901.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GATGTATTGG
NTTTTATTGG
 A C T G C G T A A C G T A C T G A C G T C G T A A C G T A C G T A C T G A C T G
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

Hoxa9/MA0594.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GATGTATTGG
TGATTTATGGC
 A C G T A C T G C G T A A C G T A C T G A C G T C G T A A C G T A C G T A C T G A C T G
C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

Hoxc9/MA0485.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GATGTATTGG-
NTGATTTATGGCC
 A C G T A C G T A C T G C G T A A C G T A C T G A C G T C G T A A C G T A C G T A C T G A C T G A C G T
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GATGTATTGG
TTTTTATTGG
 A C T G C G T A A C G T A C T G A C G T C G T A A C G T A C G T A C T G A C T G
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GATGTATTGG-
TGATTTATGGCC
 A C G T A C T G C G T A A C G T A C T G A C G T C G T A A C G T A C G T A C T G A C T G A C G T
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GATGTATTGG
ATGATKGATGRC
 A C G T A C G T A C T G C G T A A C G T A C T G A C G T C G T A A C G T A C G T A C T G A C T G
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GATGTATTGG-
TGATTTATGGCC
 A C G T A C T G C G T A A C G T A C T G A C G T C G T A A C G T A C G T A C T G A C T G A C G T
C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GATGTATTGG-
-TTTTATKRGG
 A C T G C G T A A C G T A C T G A C G T C G T A A C G T A C G T A C T G A C T G A C G T
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

PB0121.1_Foxj3_2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GATGTATTGG----
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GATGTATTGG
NTTTTATTGG
 A C T G C G T A A C G T A C T G A C G T C G T A A C G T A C G T A C T G A C T G
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G