Information for 11-TTGTCTTGCG (Motif 35)

A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C G T A C G T A A C T G C G T A A G T C C G T A C G T A
p-value:1e-3
log p-value:-7.630e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets90.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6/MA0515.1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TTGTCTTGCG
CCATTGTTTT---
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C A C T G
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTGTCTTGCG
CTGTCTGG--
 A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTGTCTTGCG---
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTGTCTTGCG
TWGTCTGV--
 A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTGTCTTGCG
CCTTTGTTTT---
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C A C T G
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTGTCTTGCG
CCATTGTTNY---
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C A C T G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TTGTCTTGCG
CTCATTGTC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C A C T G
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTGTCTTGCG---
-TGTCTGDCACCT
 A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

ZBTB33/MA0527.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTGTCTTGCG-------
--CTCTCGCGAGATCTG
 A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTGTCTTGCG
VBSYGTCTGG--
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T