Information for 10-CGTCAGTCAG (Motif 34)

A G T C A C T G A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A A G T C A C G T A C T G C G T A A G T C A C T G
p-value:1e-3
log p-value:-7.630e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 0.0bp
Average Position of motif in Background39.4 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CGTCAGTCAG
SCTGTCAVTCAV
 A C G T A C G T A G T C A C T G A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C T G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CGTCAGTCAG
NCTGTCAATCAN
 A C G T A C G T A G T C A C T G A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C T G
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

FOS::JUN/MA0099.2/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CGTCAGTCAG
--TGAGTCA-
 A G T C A C T G A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C T G
A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CGTCAGTCAG--
--TGAGTCAGCA
 A G T C A C T G A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C T G A C G T A C G T
A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CGTCAGTCAG
GSCTGTCACTCA-
 A C G T A C G T A C G T A G T C A C T G A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C T G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGTCAGTCAG
ACGTCA-----
 A C G T A G T C A C T G A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C T G
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGTCAGTCAG--
--TGACTCAGCA
 A G T C A C T G A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A G C T A C T G C G T A A T G C C G A T G T A C C T G A A C T G A T G C G C T A

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGTCAGTCAG-
-ATGASTCATY
 A G T C A C T G A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C T G A C G T
A C G T T C G A G A C T C A T G G C T A A T C G C G A T G T A C C G T A A G C T G A T C

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGTCAGTCAG
GATGAGTCAT
 A G T C A C T G A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C T G
T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGTCAGTCAG--
NATGASTCABNN
 A G T C A C T G A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C T G A C G T A C G T
C T A G T C G A C G A T A C T G C G T A T A C G A G C T T G A C G C T A A C G T G A T C T A G C