Information for 12-GCGCCCAGCTGCC (Motif 29)

A C T G A G T C T C A G A T G C G T A C G T A C C T G A A C T G A T G C A C G T A C T G T A G C A G T C
Reverse Opposite:
A C T G A C T G A G T C T C G A A T C G G T A C G A C T A C T G C A T G A T C G A G T C C T A G G T A C
p-value:1e-3
log p-value:-8.649e+00
Information Content per bp:1.617
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif22.73%
Number of Background Sequences with motif1126.8
Percentage of Background Sequences with motif2.49%
Average Position of motif in Targets41.1 +/- 23.3bp
Average Position of motif in Background48.7 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCGCCCAGCTGCC
GCCGCGCAGTGCGT--
 A C G T A C G T A C G T A C T G A G T C T C A G A T G C G T A C G T A C C T G A A C T G A T G C A C G T A C T G T A G C A G T C
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GCGCCCAGCTGCC
---CGCAGCTGCG
 A C T G A G T C T C A G A T G C G T A C G T A C C T G A A C T G A T G C A C G T A C T G T A G C A G T C
A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCGCCCAGCTGCC
--NNACAGCTGC-
 A C T G A G T C T C A G A T G C G T A C G T A C C T G A A C T G A T G C A C G T A C T G T A G C A G T C
A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GCGCCCAGCTGCC
--NNGCAGCTGTC
 A C T G A G T C T C A G A T G C G T A C G T A C C T G A A C T G A T G C A C G T A C T G T A G C A G T C
A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.52
Offset:8
Orientation:forward strand
Alignment:GCGCCCAGCTGCC----
--------CTGCCCGCA
 A C T G A G T C T C A G A T G C G T A C G T A C C T G A A C T G A T G C A C G T A C T G T A G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GCGCCCAGCTGCC
-NNVVCAGCTGBN
 A C T G A G T C T C A G A T G C G T A C G T A C C T G A A C T G A T G C A C G T A C T G T A G C A G T C
A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.50
Offset:-7
Orientation:forward strand
Alignment:-------GCGCCCAGCTGCC
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C T C A G A T G C G T A C G T A C C T G A A C T G A T G C A C G T A C T G T A G C A G T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GCGCCCAGCTGCC
--NAHCAGCTGD-
 A C T G A G T C T C A G A T G C G T A C G T A C C T G A A C T G A T G C A C G T A C T G T A G C A G T C
A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T

PAX5/MA0014.2/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GCGCCCAGCTGCC---
GTCACGCTTGGCTGCNCNN
 A C G T A C G T A C G T A C T G A G T C T C A G A T G C G T A C G T A C C T G A A C T G A T G C A C G T A C T G T A G C A G T C A C G T A C G T A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:GCGCCCAGCTGCC
------NGCTN--
 A C T G A G T C T C A G A T G C G T A C G T A C C T G A A C T G A T G C A C G T A C T G T A G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T