Information for 16-RCMKAKMAWRSAWAWM (Motif 22)

C T A G A G T C G T C A A C G T C T G A A C T G G T C A C G T A C G T A C T G A A T G C C G T A C G T A C G T A C G A T G T A C
Reverse Opposite:
A C T G G C T A A C G T G C A T A C G T A T C G A G C T C G A T A C G T A C G T G T A C A G C T G T C A A C G T A C T G A G T C
p-value:1e-6
log p-value:-1.484e+01
Information Content per bp:1.741
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif13.64%
Number of Background Sequences with motif28.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets30.7 +/- 15.3bp
Average Position of motif in Background54.6 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:RCMKAKMAWRSAWAWM--
-------AAGGATATNTN
 C T A G A G T C G T C A A C G T C T G A A C T G G T C A C G T A C G T A C T G A A T G C C G T A C G T A C G T A C G A T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:RCMKAKMAWRSAWAWM--
-----ATATGCAAATNNN
 C T A G A G T C G T C A A C G T C T G A A C T G G T C A C G T A C G T A C T G A A T G C C G T A C G T A C G T A C G A T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:RCMKAKMAWRSAWAWM
------NATGGAAAAN
 C T A G A G T C G T C A A C G T C T G A A C T G G T C A C G T A C G T A C T G A A T G C C G T A C G T A C G T A C G A T G T A C
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:4
Score:0.52
Offset:2
Orientation:forward strand
Alignment:RCMKAKMAWRSAWAWM--
--AAAGTAAACAAAAATT
 C T A G A G T C G T C A A C G T C T G A A C T G G T C A C G T A C G T A C T G A A T G C C G T A C G T A C G T A C G A T G T A C A C G T A C G T
A C G T A C G T G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:RCMKAKMAWRSAWAWM
-----TTATGCAAAT-
 C T A G A G T C G T C A A C G T C T G A A C T G G T C A C G T A C G T A C T G A A T G C C G T A C G T A C G T A C G A T G T A C
A C G T A C G T A C G T A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--RCMKAKMAWRSAWAWM
AAACAGACAAAGGAAT--
 A C G T A C G T C T A G A G T C G T C A A C G T C T G A A C T G G T C A C G T A C G T A C T G A A T G C C G T A C G T A C G T A C G A T G T A C
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:7
Score:0.51
Offset:4
Orientation:forward strand
Alignment:RCMKAKMAWRSAWAWM
----AATATGCAAATT
 C T A G A G T C G T C A A C G T C T G A A C T G G T C A C G T A C G T A C T G A A T G C C G T A C G T A C G T A C G A T G T A C
A C G T A C G T A C G T A C G T G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

PBX1/MA0070.1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:RCMKAKMAWRSAWAWM
--CCATCAATCAAA--
 C T A G A G T C G T C A A C G T C T G A A C T G G T C A C G T A C G T A C T G A A T G C C G T A C G T A C G T A C G A T G T A C
A C G T A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:forward strand
Alignment:RCMKAKMAWRSAWAWM
------TATGCAAAT-
 C T A G A G T C G T C A A C G T C T G A A C T G G T C A C G T A C G T A C T G A A T G C C G T A C G T A C G T A C G A T G T A C
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T

BCL6B/MA0731.1/Jaspar

Match Rank:10
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----RCMKAKMAWRSAWAWM
TGAATTCCTAGAAAGCA----
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C G T C A A C G T C T G A A C T G G T C A C G T A C G T A C T G A A T G C C G T A C G T A C G T A C G A T G T A C
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A A C G T A C G T A C G T A C G T