Information for 1-AGTGMRKYCG (Motif 20)

C G T A A C T G A C G T A C T G G T A C C T G A A C G T A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G C T A G G T C A A G C T A C T G A G T C C G T A A G T C A C G T
p-value:1e-6
log p-value:-1.484e+01
Information Content per bp:1.852
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif13.64%
Number of Background Sequences with motif28.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets37.7 +/- 20.5bp
Average Position of motif in Background55.9 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGTGMRKYCG
TTRAGTGSYK---
 A C G T A C G T A C G T C G T A A C T G A C G T A C T G G T A C C T G A A C G T A G T C A G T C A C T G
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGTGMRKYCG-
CAGTGTGGTCGC
 A C G T C G T A A C T G A C G T A C T G G T A C C T G A A C G T A G T C A G T C A C T G A C G T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

NKX2-8/MA0673.1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGTGMRKYCG
NTCAAGTGG-----
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G G T A C C T G A A C G T A G T C A G T C A C T G
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGTGMRKYCG
TTGAGTGSTT---
 A C G T A C G T A C G T C G T A A C T G A C G T A C T G G T A C C T G A A C G T A G T C A G T C A C T G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGTGMRKYCG
BTBRAGTGSN----
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G G T A C C T G A A C G T A G T C A G T C A C T G
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AGTGMRKYCG
NTCAAGTGGN----
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G G T A C C T G A A C G T A G T C A G T C A C T G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGTGMRKYCG
TTAAGTGCTT---
 A C G T A C G T A C G T C G T A A C T G A C G T A C T G G T A C C T G A A C G T A G T C A G T C A C T G
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGTGMRKYCG
TTAAGTGC-----
 A C G T A C G T A C G T C G T A A C T G A C G T A C T G G T A C C T G A A C G T A G T C A G T C A C T G
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGTGMRKYCG
CTYRAGTGSY----
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G G T A C C T G A A C G T A G T C A G T C A C T G
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGTGMRKYCG
NNNANTGA-----
 A C G T A C G T A C G T C G T A A C T G A C G T A C T G G T A C C T G A A C G T A G T C A G T C A C T G
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T A C G T