Information for 3-AGCTCYRCCTCCWGGG (Motif 3)

G T C A A C T G A G T C G A C T A G T C A G T C C T A G A G T C A T G C A C G T A T G C A T G C C G A T A C T G A T C G A C T G
Reverse Opposite:
T G A C A T G C G T A C C G T A A T C G A T C G G T C A A T C G C T A G G A T C C T A G C T A G C T G A T C A G G T A C A C G T
p-value:1e-11
log p-value:-2.681e+01
Information Content per bp:1.702
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif66.8
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets47.8 +/- 27.4bp
Average Position of motif in Background45.2 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGCTCYRCCTCCWGGG
-GCTCCGCCCMCY---
 G T C A A C T G A G T C G A C T A G T C A G T C C T A G A G T C A T G C A C G T A T G C A T G C C G A T A C T G A T C G A C T G
A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCYRCCTCCWGGG
NAGCCCCGCCCCCN---
 A C G T G T C A A C T G A G T C G A C T A G T C A G T C C T A G A G T C A T G C A C G T A T G C A T G C C G A T A C T G A T C G A C T G
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AGCTCYRCCTCCWGGG
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T G T C A A C T G A G T C G A C T A G T C A G T C C T A G A G T C A T G C A C G T A T G C A T G C C G A T A C T G A T C G A C T G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGCTCYRCCTCCWGGG
-GCCCCGCCCCCTCCC
 G T C A A C T G A G T C G A C T A G T C A G T C C T A G A G T C A T G C A C G T A T G C A T G C C G A T A C T G A T C G A C T G
A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGCTCYRCCTCCWGGG
-GCCCCGCCCCC----
 G T C A A C T G A G T C G A C T A G T C A G T C C T A G A G T C A T G C A C G T A T G C A T G C C G A T A C T G A T C G A C T G
A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AGCTCYRCCTCCWGGG
----CCCCCTGCTGTG
 G T C A A C T G A G T C G A C T A G T C A G T C C T A G A G T C A T G C A C G T A T G C A T G C C G A T A C T G A T C G A C T G
A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCYRCCTCCWGGG--
TAGCGCCCCCTGGTGGCCA
 A C G T G T C A A C T G A G T C G A C T A G T C A G T C C T A G A G T C A T G C A C G T A T G C A T G C C G A T A C T G A T C G A C T G A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGCTCYRCCTCCWGGG
GGCCCCGCCCCC----
 G T C A A C T G A G T C G A C T A G T C A G T C C T A G A G T C A T G C A C G T A T G C A T G C C G A T A C T G A T C G A C T G
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGCTCYRCCTCCWGGG
-GCTCGGSCTC-----
 G T C A A C T G A G T C G A C T A G T C A G T C C T A G A G T C A T G C A C G T A T G C A T G C C G A T A C T G A T C G A C T G
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGCTCYRCCTCCWGGG---
----TCNCCTGCTGNGNNN
 G T C A A C T G A G T C G A C T A G T C A G T C C T A G A G T C A T G C A C G T A T G C A T G C C G A T A C T G A T C G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G