Information for 5-CACGTCTCCT (Motif 12)

G T A C C T G A A G T C A T C G G C A T A G T C A C G T A T G C A G T C A G C T
Reverse Opposite:
C T G A C T A G T A C G C G T A C T A G C G T A T A G C A C T G A G C T A C T G
p-value:1e-9
log p-value:-2.155e+01
Information Content per bp:1.834
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.62%
Number of Background Sequences with motif232.0
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets57.0 +/- 27.2bp
Average Position of motif in Background52.3 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CACGTCTCCT
GCACGTACCC-
 A C G T G T A C C T G A A G T C A T C G G C A T A G T C A C G T A T G C A G T C A G C T
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T

Hes2/MA0616.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CACGTCTCCT--
GCACGTGTCNNNN
 A C G T G T A C C T G A A G T C A T C G G C A T A G T C A C G T A T G C A G T C A G C T A C G T A C G T
A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CACGTCTCCT
GCACGTAY---
 A C G T G T A C C T G A A G T C A T C G G C A T A G T C A C G T A T G C A G T C A G C T
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CACGTCTCCT
GCACGTNC---
 A C G T G T A C C T G A A G T C A T C G G C A T A G T C A C G T A T G C A G T C A G C T
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CACGTCTCCT
GGCACGTGNC--
 A C G T A C G T G T A C C T G A A G T C A T C G G C A T A G T C A C G T A T G C A G T C A G C T
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T A C G T

XBP1/MA0844.1/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CACGTCTCCT
AATGCCACGTCATC-
 A C G T A C G T A C G T A C G T A C G T G T A C C T G A A G T C A T C G G C A T A G T C A C G T A T G C A G T C A G C T
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C A C G T

CREB3/MA0638.1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CACGTCTCCT
GTGCCACGTCATCA
 A C G T A C G T A C G T A C G T G T A C C T G A A G T C A T C G G C A T A G T C A C G T A T G C A G T C A G C T
T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

Creb3l2/MA0608.1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CACGTCTCCT
ACACGTGGC--
 A C G T G T A C C T G A A G T C A T C G G C A T A G T C A C G T A T G C A G T C A G C T
G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CACGTCTCCT
BGCACGTA----
 A C G T A C G T G T A C C T G A A G T C A T C G G C A T A G T C A C G T A T G C A G T C A G C T
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACGTCTCCT
GGCACGTGTC--
 A C G T A C G T G T A C C T G A A G T C A T C G G C A T A G T C A C G T A T G C A G T C A G C T
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T A C G T