Information for 5-TSTCCAGSCATGASAG (Motif 9)

A C G T A T G C A G C T A G T C A G T C C G T A A C T G A T C G A G T C C G T A C A G T A C T G G T C A A T C G C G T A A C T G
Reverse Opposite:
A G T C A C G T A T G C A C G T A G T C G C T A A C G T A C T G A T G C G T A C A C G T A C T G A C T G C T G A A T C G C G T A
p-value:1e-10
log p-value:-2.505e+01
Information Content per bp:1.843
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.0 +/- 8.7bp
Average Position of motif in Background14.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TSTCCAGSCATGASAG
ATGCCCGGGCATGT---
 A C G T A C G T A T G C A G C T A G T C A G T C C G T A A C T G A T C G A G T C C G T A C A G T A C T G G T C A A T C G C G T A A C T G
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TSTCCAGSCATGASAG
CAAATCCAGACATCACA-
 A C G T A C G T A C G T A T G C A G C T A G T C A G T C C G T A A C T G A T C G A G T C C G T A C A G T A C T G G T C A A T C G C G T A A C T G
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TSTCCAGSCATGASAG--
---SCAGYCADGCATGAC
 A C G T A T G C A G C T A G T C A G T C C G T A A C T G A T C G A G T C C G T A C A G T A C T G G T C A A T C G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TSTCCAGSCATGASAG
TGCCCAGNHW------
 A C G T A T G C A G C T A G T C A G T C C G T A A C T G A T C G A G T C C G T A C A G T A C T G G T C A A T C G C G T A A C T G
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

TP53/MA0106.3/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TSTCCAGSCATGASAG
AACATGCCCGGGCATGTC--
 A C G T A C G T A C G T A C G T A C G T A T G C A G C T A G T C A G T C C G T A A C T G A T C G A G T C C G T A C A G T A C T G G T C A A T C G C G T A A C T G
C T G A C T G A G A T C C G T A G C A T T C A G G A T C G A T C A G T C C T A G C T A G C T A G A T G C G C T A G C A T C T A G G A C T G A T C A C G T A C G T

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:6
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------TSTCCAGSCATGASAG
NGGGCATGTCTGGGCATGTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A G T C A G T C C G T A A C T G A T C G A G T C C G T A C A G T A C T G G T C A A T C G C G T A A C T G
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C A C G T A C G T

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:7
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------TSTCCAGSCATGASAG
NGGGCATGTCTGGGCATGTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A G T C A G T C C G T A A C T G A T C G A G T C C G T A C A G T A C T G G T C A A T C G C G T A A C T G
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:8
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----TSTCCAGSCATGASAG
NNNCTTTCCAGGAAA-----
 A C G T A C G T A C G T A C G T A C G T A T G C A G C T A G T C A G T C C G T A A C T G A T C G A G T C C G T A C A G T A C T G G T C A A T C G C G T A A C T G
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TSTCCAGSCATGASAG
-TCCCAGMCRAGCCCC
 A C G T A T G C A G C T A G T C A G T C C G T A A C T G A T C G A G T C C G T A C A G T A C T G G T C A A T C G C G T A A C T G
A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:TSTCCAGSCATGASAG
----AAGGCAAGTGT-
 A C G T A T G C A G C T A G T C A G T C C G T A A C T G A T C G A G T C C G T A C A G T A C T G G T C A A T C G C G T A A C T G
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T