Information for 8-VGCAGTGTGCAGA (Motif 15)

T C A G A C T G A G T C C G T A T C A G A C G T A C T G C G A T A C T G A T G C C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C C G A T A T C G A G T C G C T A G T A C C G T A A G T C C G A T A C T G A G T C A G T C
p-value:1e-9
log p-value:-2.164e+01
Information Content per bp:1.837
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets39.1 +/- 22.7bp
Average Position of motif in Background53.8 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MTF1/MA0863.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-VGCAGTGTGCAGA
GTGCCGTGTGCAAA
 A C G T T C A G A C T G A G T C C G T A T C A G A C G T A C T G C G A T A C T G A T G C C G T A A C T G C G T A
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-VGCAGTGTGCAGA--
GGGCCGTGTGCAAAAA
 A C G T T C A G A C T G A G T C C G T A T C A G A C G T A C T G C G A T A C T G A T G C C G T A A C T G C G T A A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:VGCAGTGTGCAGA-----
-TACATGTGCACATAAAA
 T C A G A C T G A G T C C G T A T C A G A C G T A C T G C G A T A C T G A T G C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----VGCAGTGTGCAGA
NNNTGGCAGTTGGTNN-
 A C G T A C G T A C G T A C G T T C A G A C T G A G T C C G T A T C A G A C G T A C T G C G A T A C T G A T G C C G T A A C T G C G T A
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G A C G T

SOX8/MA0868.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:VGCAGTGTGCAGA---
AACAATGTGCAGTGTT
 T C A G A C T G A G T C C G T A T C A G A C G T A C T G C G A T A C T G A T G C C G T A A C T G C G T A A C G T A C G T A C G T
C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----VGCAGTGTGCAGA
NNNANTGCAGTGCNNTT-
 A C G T A C G T A C G T A C G T A C G T T C A G A C T G A G T C C G T A T C A G A C G T A C T G C G A T A C T G A T G C C G T A A C T G C G T A
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-VGCAGTGTGCAGA
TGGCAGTTGG----
 A C G T T C A G A C T G A G T C C G T A T C A G A C G T A C T G C G A T A C T G A T G C C G T A A C T G C G T A
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:VGCAGTGTGCAGA-
---AATTTGCTGAC
 T C A G A C T G A G T C C G T A T C A G A C G T A C T G C G A T A C T G A T G C C G T A A C T G C G T A A C G T
A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

PB0150.1_Mybl1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---VGCAGTGTGCAGA
CACGGCAGTTGGTNN-
 A C G T A C G T A C G T T C A G A C T G A G T C C G T A T C A G A C G T A C T G C G A T A C T G A T G C C G T A A C T G C G T A
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:VGCAGTGTGCAGA-----
-CAGATGTGCACATACGT
 T C A G A C T G A G T C C G T A T C A G A C G T A C T G C G A T A C T G A T G C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T