Information for 2-RTTGCAWAAC (Motif 3)

T C A G A C G T A C G T C A T G A G T C C G T A G C A T G T C A C G T A A G T C
Reverse Opposite:
T C A G A C G T A C G T C G T A C G A T A C T G G T A C C G T A C G T A A G T C
p-value:1e-68
log p-value:-1.574e+02
Information Content per bp:1.774
Number of Target Sequences with motif162.0
Percentage of Target Sequences with motif20.30%
Number of Background Sequences with motif1757.5
Percentage of Background Sequences with motif3.73%
Average Position of motif in Targets51.1 +/- 24.2bp
Average Position of motif in Background50.6 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBPA/MA0102.3/Jaspar

Match Rank:1
Score:0.93
Offset:0
Orientation:forward strand
Alignment:RTTGCAWAAC-
ATTGCACAATA
 T C A G A C G T A C G T C A T G A G T C C G T A G C A T G T C A C G T A A G T C A C G T
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:2
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:RTTGCAWAAC
VTTRCATAAY
 T C A G A C G T A C G T C A T G A G T C C G T A G C A T G T C A C G T A A G T C
T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:3
Score:0.87
Offset:0
Orientation:forward strand
Alignment:RTTGCAWAAC
ATTGCATAA-
 T C A G A C G T A C G T C A T G A G T C C G T A G C A T G T C A C G T A A G T C
T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A A C G T

CEBPE/MA0837.1/Jaspar

Match Rank:4
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:RTTGCAWAAC
ATTGCGCAAT
 T C A G A C G T A C G T C A T G A G T C C G T A G C A T G T C A C G T A A G T C
T C G A C G A T C A G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.80
Offset:0
Orientation:forward strand
Alignment:RTTGCAWAAC
ATTGCGCAAC
 T C A G A C G T A C G T C A T G A G T C C G T A G C A T G T C A C G T A A G T C
T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C

HLF/MA0043.2/Jaspar

Match Rank:6
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-RTTGCAWAAC-
CATTACGTAACC
 A C G T T C A G A C G T A C G T C A T G A G T C C G T A G C A T G T C A C G T A A G T C A C G T
G A T C T C G A G C A T A C G T C T G A A G T C T C A G G A C T G T C A C G T A A G T C G T A C

CEBPB/MA0466.2/Jaspar

Match Rank:7
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:RTTGCAWAAC
ATTGCGCAAT
 T C A G A C G T A C G T C A T G A G T C C G T A G C A T G T C A C G T A A G T C
T C G A C A G T A C G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T

CEBPD/MA0836.1/Jaspar

Match Rank:8
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:RTTGCAWAAC
ATTGCGCAAT
 T C A G A C G T A C G T C A T G A G T C C G T A G C A T G T C A C G T A A G T C
T C G A A C G T C A G T C A T G A G T C C T A G G A T C G T C A G T C A A G C T

NFIL3/MA0025.1/Jaspar

Match Rank:9
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--RTTGCAWAAC
ANGTTACATAA-
 A C G T A C G T T C A G A C G T A C G T C A T G A G T C C G T A G C A T G T C A C G T A A G T C
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T

TEF/MA0843.1/Jaspar

Match Rank:10
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-RTTGCAWAAC-
TATTACGTAACA
 A C G T T C A G A C G T A C G T C A T G A G T C C G T A G C A T G T C A C G T A A G T C A C G T
A G C T T C G A G C A T C G A T C T G A G A T C C T A G A G C T G C T A C T G A A G T C T G C A