Information for 5-CMRAGYTCACTWTRSG (Motif 14)

A G T C G T C A C T G A C G T A A C T G A G C T C G A T G T A C C G T A A G T C A C G T C G A T A C G T C T A G T A G C A C T G
Reverse Opposite:
G T A C A T C G A G T C C G T A C G T A C G T A A C T G A C G T C A T G C G T A C T G A A G T C A C G T A G C T A C G T A C T G
p-value:1e-8
log p-value:-1.951e+01
Information Content per bp:1.831
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.5 +/- 20.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CMRAGYTCACTWTRSG
CAAAGGTCAG------
 A G T C G T C A C T G A C G T A A C T G A G C T C G A T G T A C C G T A A G T C A C G T C G A T A C G T C T A G T A G C A C T G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CMRAGYTCACTWTRSG
--AAGGTCAC------
 A G T C G T C A C T G A C G T A A C T G A G C T C G A T G T A C C G T A A G T C A C G T C G A T A C G T C T A G T A G C A C T G
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CMRAGYTCACTWTRSG
TCTCAAAGGTCACCTG---
 A C G T A C G T A C G T A G T C G T C A C T G A C G T A A C T G A G C T C G A T G T A C C G T A A G T C A C G T C G A T A C G T C T A G T A G C A C T G
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------CMRAGYTCACTWTRSG
CANAGNNCAAAGTCCA-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A C T G A C G T A A C T G A G C T C G A T G T A C C G T A A G T C A C G T C G A T A C G T C T A G T A G C A C T G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CMRAGYTCACTWTRSG
AGAGTCCAAAGTCCA-------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A C T G A C G T A A C T G A G C T C G A T G T A C C G T A A G T C A C G T C G A T A C G T C T A G T A G C A C T G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CMRAGYTCACTWTRSG---
NNGAGGTTACTNNAGGTCA
 A G T C G T C A C T G A C G T A A C T G A G C T C G A T G T A C C G T A A G T C A C G T C G A T A C G T C T A G T A G C A C T G A C G T A C G T A C G T
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CMRAGYTCACTWTRSG
TCAAGGTCAN------
 A G T C G T C A C T G A C G T A A C T G A G C T C G A T G T A C C G T A A G T C A C G T C G A T A C G T C T A G T A G C A C T G
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CMRAGYTCACTWTRSG
GGCAAAAGTCCAATAA---
 A C G T A C G T A C G T A G T C G T C A C T G A C G T A A C T G A G C T C G A T G T A C C G T A A G T C A C G T C G A T A C G T C T A G T A G C A C T G
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CMRAGYTCACTWTRSG
TCTCAAAGGTCACGAG---
 A C G T A C G T A C G T A G T C G T C A C T G A C G T A A C T G A G C T C G A T G T A C C G T A A G T C A C G T C G A T A C G T C T A G T A G C A C T G
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CMRAGYTCACTWTRSG-
GCAACCTCATTATNNNN
 A G T C G T C A C T G A C G T A A C T G A G C T C G A T G T A C C G T A A G T C A C G T C G A T A C G T C T A G T A G C A C T G A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T