Information for 6-GVTGTTAACT (Motif 28)

A C T G T G A C C G A T A C T G C G A T A C G T C T G A G T C A A G T C A C G T
Reverse Opposite:
C G T A A C T G C A G T G A C T C G T A C G T A G T A C C G T A A C T G A G T C
p-value:1e-7
log p-value:-1.797e+01
Information Content per bp:1.804
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif87.9
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets60.3 +/- 23.3bp
Average Position of motif in Background50.0 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0168.1_Hnf1b/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GVTGTTAACT------
AGCTGTTAACTAGCCGT
 A C G T A C T G T G A C C G A T A C T G C G A T A C G T C T G A G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

PH0167.1_Tcf1/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--GVTGTTAACT-----
CCTTAGTTAACTAAAAT
 A C G T A C G T A C T G T G A C C G A T A C T G C G A T A C G T C T G A G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:3
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---GVTGTTAACT----
NNNNCTGTTAACNNTNN
 A C G T A C G T A C G T A C T G T G A C C G A T A C T G C G A T A C G T C T G A G T C A A G T C A C G T A C G T A C G T A C G T A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

PB0081.1_Tcf1_1/Jaspar

Match Rank:4
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GVTGTTAACT-----
ACTTAGTTAACTAAAAA
 A C G T A C G T A C T G T G A C C G A T A C T G C G A T A C G T C T G A G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

HMBOX1/MA0895.1/Jaspar

Match Rank:5
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:GVTGTTAACT---
---GTTAACTAGN
 A C T G T G A C C G A T A C T G C G A T A C G T C T G A G T C A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:6
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GVTGTTAACT-------
GANGTTAACTAGTTTNN
 A C T G T G A C C G A T A C T G C G A T A C G T C T G A G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:7
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GVTGTTAACT--
CNTGTTTACATA
 A C T G T G A C C G A T A C T G C G A T A C G T C T G A G T C A A G T C A C G T A C G T A C G T
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GVTGTTAACT--
--TGTTTACTTT
 A C T G T G A C C G A T A C T G C G A T A C G T C T G A G T C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXO6/MA0849.1/Jaspar

Match Rank:9
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GVTGTTAACT
--TGTTTAC-
 A C T G T G A C C G A T A C T G C G A T A C G T C T G A G T C A A G T C A C G T
A C G T A C G T A G C T T C A G A C G T C A G T A C G T G C T A A G T C A C G T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:10
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GVTGTTAACT
--TGTTTACH
 A C T G T G A C C G A T A C T G C G A T A C G T C T G A G T C A A G T C A C G T
A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G C T A