Information for 4-GGTGGGTCAA (Motif 20)

C T A G C T A G C G A T C T A G C T A G T C A G A G C T T G A C C G T A G C T A
Reverse Opposite:
C G A T G C A T A C T G T C G A A G T C G A T C A G T C C G T A G A T C G A T C
p-value:1e-9
log p-value:-2.104e+01
Information Content per bp:1.681
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif7.68%
Number of Background Sequences with motif1353.6
Percentage of Background Sequences with motif2.74%
Average Position of motif in Targets45.8 +/- 28.1bp
Average Position of motif in Background51.0 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOS::JUN/MA0099.2/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GGTGGGTCAA
--TGAGTCA-
 C T A G C T A G C G A T C T A G C T A G T C A G A G C T T G A C C G T A G C T A
A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GGTGGGTCAA
---AGGTCA-
 C T A G C T A G C G A T C T A G C T A G T C A G A G C T T G A C C G T A G C T A
A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GGTGGGTCAA-
GGTGACTCATG
 C T A G C T A G C G A T C T A G C T A G T C A G A G C T T G A C C G T A G C T A A C G T
C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GGTGGGTCAA
TATAAGTAGGTCAA
 A C G T A C G T A C G T A C G T C T A G C T A G C G A T C T A G C T A G T C A G A G C T T G A C C G T A G C T A
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

PB0167.1_Sox13_2/Jaspar

Match Rank:5
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------GGTGGGTCAA-
GTATTGGGTGGGTAATT
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G C G A T C T A G C T A G T C A G A G C T T G A C C G T A G C T A A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

PB0025.1_Glis2_1/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GGTGGGTCAA--
NTNTGGGGGGTCNNNA
 A C G T A C G T A C G T A C G T C T A G C T A G C G A T C T A G C T A G T C A G A G C T T G A C C G T A G C T A A C G T A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGTGGGTCAA
-GTGGAT---
 C T A G C T A G C G A T C T A G C T A G T C A G A G C T T G A C C G T A G C T A
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGTGGGTCAA---
AGAGCGGGGTCAAGTA
 A C G T A C G T A C G T C T A G C T A G C G A T C T A G C T A G T C A G A G C T T G A C C G T A G C T A A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

JUNB/MA0490.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGTGGGTCAA
GGATGACTCAT
 A C G T C T A G C T A G C G A T C T A G C T A G T C A G A G C T T G A C C G T A G C T A
C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGTGGGTCAA---
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T C T A G C T A G C G A T C T A G C T A G T C A G A G C T T G A C C G T A G C T A A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A