Information for 5-GCCTGTTDGT (Motif 6)

A C T G G A T C A T G C A C G T A C T G C G A T G C A T C G T A C T A G A C G T
Reverse Opposite:
T G C A A G T C G C A T C G T A C G T A T G A C C G T A A T C G C T A G G T A C
p-value:1e-13
log p-value:-3.050e+01
Information Content per bp:1.673
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif5.55%
Number of Background Sequences with motif729.2
Percentage of Background Sequences with motif1.60%
Average Position of motif in Targets41.5 +/- 28.3bp
Average Position of motif in Background52.1 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GCCTGTTDGT
-GCTGTG---
 A C T G G A T C A T G C A C G T A C T G C G A T G C A T C G T A C T A G A C G T
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GCCTGTTDGT
GGNGCGNCTGTTNNN
 A C G T A C G T A C G T A C G T A C G T A C T G G A T C A T G C A C G T A C T G C G A T G C A T C G T A C T A G A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCTGTTDGT--
GSCTGTCACTCA
 A C T G G A T C A T G C A C G T A C T G C G A T G C A T C G T A C T A G A C G T A C G T A C G T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCCTGTTDGT
ACTTCCTGTT---
 A C G T A C G T A C G T A C T G G A T C A T G C A C G T A C T G C G A T G C A T C G T A C T A G A C G T
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCCTGTTDGT--
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C T G G A T C A T G C A C G T A C T G C G A T G C A T C G T A C T A G A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

PB0150.1_Mybl1_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCCTGTTDGT--
CACGGCAGTTGGTNN
 A C G T A C G T A C G T A C T G G A T C A T G C A C G T A C T G C G A T G C A T C G T A C T A G A C G T A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGTTDGT
BRRCVGTTDN-
 A C G T A C T G G A T C A T G C A C G T A C T G C G A T G C A T C G T A C T A G A C G T
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCCTGTTDGT
TGGCAGTTGG-
 A C G T A C T G G A T C A T G C A C G T A C T G C G A T G C A T C G T A C T A G A C G T
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCCTGTTDGT-
TCCTGTTTACA
 A C T G G A T C A T G C A C G T A C T G C G A T G C A T C G T A C T A G A C G T A C G T
C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCCTGTTDGT--
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C G T A C T G G A T C A T G C A C G T A C T G C G A T G C A T C G T A C T A G A C G T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T