Information for 3-AAACTACAACTCCCAG (Motif 3)

C T G A C T G A C G T A G T A C A G C T T G C A A T G C T C G A T G C A G A T C C A G T T G A C A T G C A G T C T C G A A T C G
Reverse Opposite:
A T G C A C G T A C T G T A C G A C T G G T C A C T A G A C G T A G C T A T C G A C G T T C G A A C T G C G A T A G C T A G C T
p-value:1e-16
log p-value:-3.775e+01
Information Content per bp:1.679
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.37%
Number of Background Sequences with motif211.1
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets51.6 +/- 26.8bp
Average Position of motif in Background45.8 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:1
Score:0.82
Offset:1
Orientation:forward strand
Alignment:AAACTACAACTCCCAG-----
-RACTACAACTCCCAGVAKGC
 C T G A C T G A C G T A G T A C A G C T T G C A A T G C T C G A T G C A G A T C C A G T T G A C A T G C A G T C T C G A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:2
Score:0.80
Offset:1
Orientation:forward strand
Alignment:AAACTACAACTCCCAG-----
-AACTACAATTCCCAGAATGC
 C T G A C T G A C G T A G T A C A G C T T G C A A T G C T C G A T G C A G A T C C A G T T G A C A T G C A G T C T C G A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.79
Offset:2
Orientation:forward strand
Alignment:AAACTACAACTCCCAG
--ACTACAATTCCC--
 C T G A C T G A C G T A G T A C A G C T T G C A A T G C T C G A T G C A G A T C C A G T T G A C A T G C A G T C T C G A A T C G
A C G T A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAACTACAACTCCCAG
AAACCACANN------
 C T G A C T G A C G T A G T A C A G C T T G C A A T G C T C G A T G C A G A T C C A G T T G A C A T G C A G T C T C G A A T C G
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:AAACTACAACTCCCAG---
---------TGCCCAGNHW
 C T G A C T G A C G T A G T A C A G C T T G C A A T G C T C G A T G C A G A T C C A G T T G A C A T G C A G T C T C G A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAACTACAACTCCCAG
NAAACCACAG-------
 A C G T C T G A C T G A C G T A G T A C A G C T T G C A A T G C T C G A T G C A G A T C C A G T T G A C A T G C A G T C T C G A A T C G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAACTACAACTCCCAG
AAACCGCAA-------
 C T G A C T G A C G T A G T A C A G C T T G C A A T G C T C G A T G C A G A T C C A G T T G A C A T G C A G T C T C G A A T C G
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAACTACAACTCCCAG
AAACCGCAAA------
 C T G A C T G A C G T A G T A C A G C T T G C A A T G C T C G A T G C A G A T C C A G T T G A C A T G C A G T C T C G A A T C G
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AAACTACAACTCCCAG
AAACCACAGC------
 C T G A C T G A C G T A G T A C A G C T T G C A A T G C T C G A T G C A G A T C C A G T T G A C A T G C A G T C T C G A A T C G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.54
Offset:7
Orientation:forward strand
Alignment:AAACTACAACTCCCAG------
-------ATTTCCCAGVAKSCY
 C T G A C T G A C G T A G T A C A G C T T G C A A T G C T C G A T G C A G A T C C A G T T G A C A T G C A G T C T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C