Information for 19-CGGTGGCTACGGC (Motif 21)

A G T C A C T G A C T G A C G T A C T G A C T G A G T C A C G T C T G A A G T C A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C G T A C A C T G A G C T C G T A A C T G A G T C A G T C C G T A A G T C A G T C A C T G
p-value:1e-8
log p-value:-1.882e+01
Information Content per bp:1.940
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets77.0 +/- 13.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0055.1_Rfx4_1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGGTGGCTACGGC-
NNCGTTGCTATGGNN
 A C G T A G T C A C T G A C T G A C G T A C T G A C T G A G T C A C G T C T G A A G T C A C T G A C T G A G T C A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CGGTGGCTACGGC-----
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A C T G A C T G A G T C A C G T C T G A A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGGTGGCTACGGC-
NCCGTTGCTANGNGN
 A C G T A G T C A C T G A C T G A C G T A C T G A C T G A G T C A C G T C T G A A G T C A C T G A C T G A G T C A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

ZBTB7C/MA0695.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGGTGGCTACGGC
NTCGGTGGTCGC---
 A C G T A C G T A G T C A C T G A C T G A C G T A C T G A C T G A G T C A C G T C T G A A G T C A C T G A C T G A G T C
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGGTGGCTACGGC
CTGTTGCTAGGS-
 A G T C A C T G A C T G A C G T A C T G A C T G A G T C A C G T C T G A A G T C A C T G A C T G A G T C
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGGTGGCTACGGC
-RGTGGGYGTGGC
 A G T C A C T G A C T G A C G T A C T G A C T G A G T C A C G T C T G A A G T C A C T G A C T G A G T C
A C G T C T G A T C A G C A G T C T A G A T C G A C T G G A T C C A T G A C G T C A T G A C T G A G T C

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGGTGGCTACGGC----
-CNNNGCTACTGTANNN
 A G T C A C T G A C T G A C G T A C T G A C T G A G T C A C G T C T G A A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGGTGGCTACGGC----
-TNNTGCTACTGTNNNN
 A G T C A C T G A C T G A C G T A C T G A C T G A G T C A C G T C T G A A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

ZBTB7A/MA0750.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CGGTGGCTACGGC
TCGGTGGTCGCN--
 A C G T A G T C A C T G A C T G A C G T A C T G A C T G A G T C A C G T C T G A A G T C A C T G A C T G A G T C
A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CGGTGGCTACGGC
--TWGTCTGV---
 A G T C A C T G A C T G A C G T A C T G A C T G A G T C A C G T C T G A A G T C A C T G A C T G A G T C
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T