Information for 5-WYSTCCAMTTMWT (Motif 8)

C G A T A G C T A T C G A C G T A G T C A G T C C G T A G T C A A C G T A C G T G T A C C G A T A C G T
Reverse Opposite:
C G T A C G T A A C T G C G T A C G T A A C G T C G A T A C T G A C T G C G T A A T G C C T G A C G T A
p-value:1e-9
log p-value:-2.264e+01
Information Content per bp:1.827
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif3.57%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets63.2 +/- 21.0bp
Average Position of motif in Background60.6 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5/MA0063.1/Jaspar

Match Rank:1
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:WYSTCCAMTTMWT
-----CAATTAA-
 C G A T A G C T A T C G A C G T A G T C A G T C C G T A G T C A A C G T A C G T G T A C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C G T A G T C A A C G T A C G T C T G A G C T A A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:WYSTCCAMTTMWT
---ACCACTTAA-
 C G A T A G C T A T C G A C G T A G T C A G T C C G T A G T C A A C G T A C G T G T A C C G A T A C G T
A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:WYSTCCAMTTMWT
---ACCACTTAA-
 C G A T A G C T A T C G A C G T A G T C A G T C C G T A G T C A A C G T A C G T G T A C C G A T A C G T
A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T

MSX2/MA0708.1/Jaspar

Match Rank:4
Score:0.65
Offset:4
Orientation:forward strand
Alignment:WYSTCCAMTTMWT
----CCAATTAA-
 C G A T A G C T A T C G A C G T A G T C A G T C C G T A G T C A A C G T A C G T G T A C C G A T A C G T
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-WYSTCCAMTTMWT---
CTTAACCACTTAAGGAT
 A C G T C G A T A G C T A T C G A C G T A G T C A G T C C G T A G T C A A C G T A C G T G T A C C G A T A C G T A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

ISL2/MA0914.1/Jaspar

Match Rank:6
Score:0.65
Offset:4
Orientation:forward strand
Alignment:WYSTCCAMTTMWT
----GCACTTAA-
 C G A T A G C T A T C G A C G T A G T C A G T C C G T A G T C A A C G T A C G T G T A C C G A T A C G T
A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-WYSTCCAMTTMWT---
CATAACCACTTAACAAC
 A C G T C G A T A G C T A T C G A C G T A G T C A G T C C G T A G T C A A C G T A C G T G T A C C G A T A C G T A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

MSX1/MA0666.1/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:forward strand
Alignment:WYSTCCAMTTMWT
----CCAATTAG-
 C G A T A G C T A T C G A C G T A G T C A G T C C G T A G T C A A C G T A C G T G T A C C G A T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G A C G T

Msx3/MA0709.1/Jaspar

Match Rank:9
Score:0.63
Offset:4
Orientation:forward strand
Alignment:WYSTCCAMTTMWT
----CCAATTAA-
 C G A T A G C T A T C G A C G T A G T C A G T C C G T A G T C A A C G T A C G T G T A C C G A T A C G T
A C G T A C G T A C G T A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:10
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:WYSTCCAMTTMWT
------AATTATT
 C G A T A G C T A T C G A C G T A G T C A G T C C G T A G T C A A C G T A C G T G T A C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T