Information for 5-GATAACCACA (Motif 5)

T C A G C T G A C G A T C G T A C T G A A G T C A T G C C G T A T A G C G T C A
Reverse Opposite:
C A G T A T C G A C G T T A C G A C T G A G C T A C G T G C T A G A C T A G T C
p-value:1e-15
log p-value:-3.642e+01
Information Content per bp:1.722
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif5.92%
Number of Background Sequences with motif708.6
Percentage of Background Sequences with motif1.49%
Average Position of motif in Targets48.0 +/- 25.7bp
Average Position of motif in Background49.2 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.85
Offset:2
Orientation:forward strand
Alignment:GATAACCACA--
--AAACCACANN
 T C A G C T G A C G A T C G T A C T G A A G T C A T G C C G T A T A G C G T C A A C G T A C G T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.83
Offset:1
Orientation:forward strand
Alignment:GATAACCACA-
-NAAACCACAG
 T C A G C T G A C G A T C G T A C T G A A G T C A T G C C G T A T A G C G T C A A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:GATAACCACA--
--AAACCACAGC
 T C A G C T G A C G A T C G T A C T G A A G T C A T G C C G T A T A G C G T C A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.81
Offset:1
Orientation:forward strand
Alignment:GATAACCACA---
-NWAACCACADNN
 T C A G C T G A C G A T C G T A C T G A A G T C A T G C C G T A T A G C G T C A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:GATAACCACA---
--AAACCACAGAN
 T C A G C T G A C G A T C G T A C T G A A G T C A T G C C G T A T A G C G T C A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GATAACCACA--
--AAACCGCAAA
 T C A G C T G A C G A T C G T A C T G A A G T C A T G C C G T A T A G C G T C A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GATAACCACA-
--AAACCGCAA
 T C A G C T G A C G A T C G T A C T G A A G T C A T G C C G T A T A G C G T C A A C G T
A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

PH0040.1_Hmbox1/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GATAACCACA----
GANGTTAACTAGTTTNN
 A C G T A C G T A C G T T C A G C T G A C G A T C G T A C T G A A G T C A T G C C G T A T A G C G T C A A C G T A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

HMBOX1/MA0895.1/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GATAACCACA
GTTAACTAGN
 T C A G C T G A C G A T C G T A C T G A A G T C A T G C C G T A T A G C G T C A
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GATAACCACA
-GTAAACA--
 T C A G C T G A C G A T C G T A C T G A A G T C A T G C C G T A T A G C G T C A
A C G T C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T A C G T