Information for 13-TTGTCACATG (Motif 20)

A C G T A C G T A C T G A C G T A G T C G T C A A G T C C G T A A G C T A C T G
Reverse Opposite:
A G T C C T G A A C G T A C T G A C G T A C T G C G T A A G T C C G T A C G T A
p-value:1e-6
log p-value:-1.610e+01
Information Content per bp:1.938
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.5 +/- 22.7bp
Average Position of motif in Background43.6 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:TTGTCACATG--
--GTCACATGAY
 A C G T A C G T A C T G A C G T A G T C G T C A A G T C C G T A A G C T A C T G A C G T A C G T
A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

USF2/MA0526.1/Jaspar

Match Rank:2
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:TTGTCACATG--
-GGTCACATGAC
 A C G T A C G T A C T G A C G T A G T C G T C A A G T C C G T A A G C T A C T G A C G T A C G T
A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

USF1/MA0093.2/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TTGTCACATG--
-GGTCACGTGGC
 A C G T A C G T A C T G A C G T A G T C G T C A A G T C C G T A A G C T A C T G A C G T A C G T
A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.72
Offset:2
Orientation:forward strand
Alignment:TTGTCACATG--
--GTCACGTGGT
 A C G T A C G T A C T G A C G T A G T C G T C A A G T C C G T A A G C T A C T G A C G T A C G T
A C G T A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TTGTCACATG--
--GTCACGTGGM
 A C G T A C G T A C T G A C G T A G T C G T C A A G T C C G T A A G C T A C T G A C G T A C G T
A C G T A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C

Arntl/MA0603.1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TTGTCACATG-
-GGTCACGTGC
 A C G T A C G T A C T G A C G T A G T C G T C A A G T C C G T A A G C T A C T G A C G T
A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTGTCACATG
-TGTCANYT-
 A C G T A C G T A C T G A C G T A G T C G T C A A G T C C G T A A G C T A C T G
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T

TFEB/MA0692.1/Jaspar

Match Rank:8
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TTGTCACATG--
--GTCACGTGAT
 A C G T A C G T A C T G A C G T A G T C G T C A A G T C C G T A A G C T A C T G A C G T A C G T
A C G T A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T

Mitf/MA0620.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTGTCACATG-
-GGTCACGTGG
 A C G T A C G T A C T G A C G T A G T C G T C A A G T C C G T A A G C T A C T G A C G T
A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTGTCACATG
NTGTCAN---
 A C G T A C G T A C T G A C G T A G T C G T C A A G T C C G T A A G C T A C T G
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T