Information for 9-AGCACTAGCA (Motif 13)

C T G A A C T G G A T C G T C A A T G C A C G T C G T A T C A G A T G C C G T A
Reverse Opposite:
G C A T T A C G A G T C G C A T T G C A T A C G C A G T C T A G T G A C G A C T
p-value:1e-8
log p-value:-1.998e+01
Information Content per bp:1.663
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.68%
Number of Background Sequences with motif276.8
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets50.8 +/- 27.2bp
Average Position of motif in Background50.8 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGCACTAGCA--
GGCTCYAKCAYC
 C T G A A C T G G A T C G T C A A T G C A C G T C G T A T C A G A T G C C G T A A C G T A C G T
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------AGCACTAGCA-
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G G A T C G T C A A T G C A C G T C G T A T C A G A T G C C G T A A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGCACTAGCA----
CAATCACTGGCAGAAT
 A C G T A C G T C T G A A C T G G A T C G T C A A T G C A C G T C G T A T C A G A T G C C G T A A C G T A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGCACTAGCA---
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T C T G A A C T G G A T C G T C A A T G C A C G T C G T A T C A G A T G C C G T A A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGCACTAGCA
GAGSCCGAGC-
 A C G T C T G A A C T G G A T C G T C A A T G C A C G T C G T A T C A G A T G C C G T A
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGCACTAGCA---
ADGGYAGYAGCATCT
 A C G T A C G T C T G A A C T G G A T C G T C A A T G C A C G T C G T A T C A G A T G C C G T A A C G T A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGCACTAGCA---
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T C T G A A C T G G A T C G T C A A T G C A C G T C G T A T C A G A T G C C G T A A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCACTAGCA
AAGCACTTAA-
 A C G T C T G A A C T G G A T C G T C A A T G C A C G T C G T A T C A G A T G C C G T A
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T

GCM1/MA0646.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGCACTAGCA--
-GTACCCGCATN
 C T G A A C T G G A T C G T C A A T G C A C G T C G T A T C A G A T G C C G T A A C G T A C G T
A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------AGCACTAGCA-
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G G A T C G T C A A T G C A C G T C G T A T C A G A T G C C G T A A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A