Information for 11-CCGGAACCTTTGC (Motif 10)

A T G C G T A C A C T G A T C G C T G A C G T A A G T C A G T C C G A T A C G T A G C T A T C G A G T C
Reverse Opposite:
A C T G A T G C T C G A G T C A C G T A A C T G A C T G C G A T A G C T A T G C G T A C C A T G A T C G
p-value:1e-12
log p-value:-2.828e+01
Information Content per bp:1.805
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.2 +/- 24.3bp
Average Position of motif in Background36.3 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCGGAACCTTTGC
RCCGGAARYN----
 A C G T A T G C G T A C A C T G A T C G C T G A C G T A A G T C A G T C C G A T A C G T A G C T A T C G A G T C
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCGGAACCTTTGC--
---TGACCTTTNCNT
 A T G C G T A C A C T G A T C G C T G A C G T A A G T C A G T C C G A T A C G T A G C T A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0161.1_Rxra_2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCGGAACCTTTGC--
NNNNCAACCTTCGNGA
 A C G T A T G C G T A C A C T G A T C G C T G A C G T A A G T C A G T C C G A T A C G T A G C T A T C G A G T C A C G T A C G T
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCGGAACCTTTGC
RCCGGAAGTD----
 A C G T A T G C G T A C A C T G A T C G C T G A C G T A A G T C A G T C C G A T A C G T A G C T A T C G A G T C
C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCGGAACCTTTGC--
NNNGTGACCTTTGNNN
 A C G T A T G C G T A C A C T G A T C G C T G A C G T A A G T C A G T C C G A T A C G T A G C T A T C G A G T C A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCGGAACCTTTGC--
NNNNTGACCTTTNNNN
 A C G T A T G C G T A C A C T G A T C G C T G A C G T A A G T C A G T C C G A T A C G T A G C T A T C G A G T C A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCGGAACCTTTGC----
---TGACCTTTGCCCTA
 A T G C G T A C A C T G A T C G C T G A C G T A A G T C A G T C C G A T A C G T A G C T A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

MF0001.1_ETS_class/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCGGAACCTTTGC
ACCGGAAG------
 A C G T A T G C G T A C A C T G A T C G C T G A C G T A A G T C A G T C C G A T A C G T A G C T A T C G A G T C
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CCGGAACCTTTGC-
------CCTTTGTT
 A T G C G T A C A C T G A T C G C T G A C G T A A G T C A G T C C G A T A C G T A G C T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCGGAACCTTTGC----
---TGACCTTTGCCCCA
 A T G C G T A C A C T G A T C G C T G A C G T A A G T C A G T C C G A T A C G T A G C T A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A