Information for 8-GAGTCACKAC (Motif 6)

A T C G T G C A A T C G C A G T A T G C T G C A G T A C C A G T G C T A G T A C
Reverse Opposite:
C A T G C G A T G T C A A C T G A C G T A T C G G T C A A T G C A C G T T A G C
p-value:1e-26
log p-value:-6.078e+01
Information Content per bp:1.680
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.25%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets50.5 +/- 29.0bp
Average Position of motif in Background43.4 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GAGTCACKAC
-AGTCACGC-
 A T C G T G C A A T C G C A G T A T G C T G C A G T A C C A G T G C T A G T A C
A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GAGTCACKAC
NATGAGTCACC--
 A C G T A C G T A C G T A T C G T G C A A T C G C A G T A T G C T G C A G T A C C A G T G C T A G T A C
A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GAGTCACKAC----
--GTGACGTCACCG
 A T C G T G C A A T C G C A G T A T G C T G C A G T A C C A G T G C T A G T A C A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G

FOS::JUN/MA0099.2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAGTCACKAC
TGAGTCA----
 A C G T A T C G T G C A A T C G C A G T A T G C T G C A G T A C C A G T G C T A G T A C
G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAGTCACKAC----
NNGGCCACGCCTTTN
 A C G T A T C G T G C A A T C G C A G T A T G C T G C A G T A C C A G T G C T A G T A C A C G T A C G T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

JUNB/MA0490.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GAGTCACKAC
ATGAGTCATCN-
 A C G T A C G T A T C G T G C A A T C G C A G T A T G C T G C A G T A C C A G T G C T A G T A C
T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C A C G T

JUN(var.2)/MA0489.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GAGTCACKAC--
ATGAGTCATNTNNT
 A C G T A C G T A T C G T G C A A T C G C A G T A T G C T G C A G T A C C A G T G C T A G T A C A C G T A C G T
T G C A A C G T A C T G C G T A T A C G C G A T A G T C C G T A A G C T G A T C G A C T G A T C G A T C G A C T

FOSL2/MA0478.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GAGTCACKAC
NTGAGTCATCN-
 A C G T A C G T A T C G T G C A A T C G C A G T A T G C T G C A G T A C C A G T G C T A G T A C
T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GAGTCACKAC--
--ATCACCCCAT
 A T C G T G C A A T C G C A G T A T G C T G C A G T A C C A G T G C T A G T A C A C G T A C G T
A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGTCACKAC--
CNGTCACGCCAC
 A T C G T G C A A T C G C A G T A T G C T G C A G T A C C A G T G C T A G T A C A C G T A C G T
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C