Information for 6-TCAGCAGGTG (Motif 5)

A G C T A T G C G T C A A C T G A T G C C G T A C A T G C T A G A C G T A T C G
Reverse Opposite:
A T G C G T C A G A T C G A T C C G A T A T C G A G T C C A G T A T C G C T G A
p-value:1e-32
log p-value:-7.562e+01
Information Content per bp:1.806
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.80%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets41.6 +/- 24.7bp
Average Position of motif in Background50.9 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)-1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:TCAGCAGGTG---
-SDGCAGGTGCNS
 A G C T A T G C G T C A A C T G A T G C C G T A C A T G C T A G A C G T A T C G A C G T A C G T A C G T
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:TCAGCAGGTG--
--NNCAGGTGNN
 A G C T A T G C G T C A A C T G A T G C C G T A C A T G C T A G A C G T A T C G A C G T A C G T
A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

TCF3/MA0522.2/Jaspar

Match Rank:3
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:TCAGCAGGTG--
--NNCAGGTGTN
 A G C T A T G C G T C A A C T G A T G C C G T A C A T G C T A G A C G T A T C G A C G T A C G T
A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.79
Offset:2
Orientation:forward strand
Alignment:TCAGCAGGTG-
--AACAGGTGT
 A G C T A T G C G T C A A C T G A T G C C G T A C A T G C T A G A C G T A T C G A C G T
A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-TCAGCAGGTG-
CACAGCAGGGGG
 A C G T A G C T A T G C G T C A A C T G A T G C C G T A C A T G C T A G A C G T A T C G A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:6
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-TCAGCAGGTG------
ATCCACAGGTGCGAAAA
 A C G T A G C T A T G C G T C A A C T G A T G C C G T A C A T G C T A G A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:TCAGCAGGTG--
--NNCAGGTGCG
 A G C T A T G C G T C A A C T G A T G C C G T A C A T G C T A G A C G T A T C G A C G T A C G T
A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCAGGTG
DCTCAGCAGG--
 A C G T A C G T A G C T A T G C G T C A A C T G A T G C C G T A C A T G C T A G A C G T A T C G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCAGGTG---
DCHCAGCAGGRGGCC
 A C G T A C G T A G C T A T G C G T C A A C T G A T G C C G T A C A T G C T A G A C G T A T C G A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:TCAGCAGGTG--
--GACAGGTGTN
 A G C T A T G C G T C A A C T G A T G C C G T A C A T G C T A G A C G T A T C G A C G T A C G T
A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A