Information for 3-TTTCTCTGAA (Motif 3)

C A G T A G C T G A C T A G T C A C G T A G T C A G C T T A C G G T C A C G T A
Reverse Opposite:
G A C T A C G T A G T C C T G A A C T G T C G A A C T G C G T A C T G A G C T A
p-value:1e-38
log p-value:-8.762e+01
Information Content per bp:1.819
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.14%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.3 +/- 28.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TTTCTCTGAA--
TTTCTNAGAAAN
 C A G T A G C T G A C T A G T C A C G T A G T C A G C T T A C G G T C A C G T A A C G T A C G T
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

Stat4/MA0518.1/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TTTCTCTGAA-
NNNTTTCCTGGAAA
 A C G T A C G T A C G T C A G T A G C T G A C T A G T C A C G T A G T C A G C T T A C G G T C A C G T A A C G T
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TTTCTCTGAA
ATTTCCAAGAA
 A C G T C A G T A G C T G A C T A G T C A C G T A G T C A G C T T A C G G T C A C G T A
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

STAT1/MA0137.3/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTTCTCTGAA-
TTTCCTGGAAA
 C A G T A G C T G A C T A G T C A C G T A G T C A G C T T A C G G T C A C G T A A C G T
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTTCTCTGAA--
NATTTCCNGGAAAT
 A C G T A C G T C A G T A G C T G A C T A G T C A C G T A G T C A G C T T A C G G T C A C G T A A C G T A C G T
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T

STAT3/MA0144.2/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTCTCTGAA-
TTTCCCAGAAN
 C A G T A G C T G A C T A G T C A C G T A G T C A G C T T A C G G T C A C G T A A C G T
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTTCTCTGAA
ACTTTCACTTTC
 A C G T A C G T C A G T A G C T G A C T A G T C A C G T A G T C A G C T T A C G G T C A C G T A
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

Stat6/MA0520.1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TTTCTCTGAA--
CATTTCCTGAGAAAT
 A C G T A C G T A C G T C A G T A G C T G A C T A G T C A C G T A G T C A G C T T A C G G T C A C G T A A C G T A C G T
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTTCTCTGAA--
TTTCCNGGAAAN
 C A G T A G C T G A C T A G T C A C G T A G T C A G C T T A C G G T C A C G T A A C G T A C G T
A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTTCTCTGAA
TTCCKNAGAA
 C A G T A G C T G A C T A G T C A C G T A G T C A G C T T A C G G T C A C G T A
G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A