Information for 21-TGCATCTGGGGCA (Motif 29)

A C G T A C T G A G T C C G T A A C G T A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A G T C A G T C A G T C C G T A A C T G C G T A A C G T A C T G A G T C C G T A
p-value:1e-11
log p-value:-2.542e+01
Information Content per bp:1.530
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets54.4 +/- 21.7bp
Average Position of motif in Background41.3 +/- 10.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGCATCTGGGGCA
NVCAGCTGBBNN-
 A C G T A C T G A G T C C G T A A C G T A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G T A
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGCATCTGGGGCA
AACATCTGGA---
 A C G T A C T G A G T C C G T A A C G T A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G T A
T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGCATCTGGGGCA
TGCCCTNAGGGCA
 A C G T A C T G A G T C C G T A A C G T A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGCATCTGGGGCA-----
--NNNNTTGGGCACNNCN
 A C G T A C T G A G T C C G T A A C G T A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGCATCTGGGGCA
TGCCCTGAGGGCA
 A C G T A C T G A G T C C G T A A C G T A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TGCATCTGGGGCA
---AAYTAGGTCA
 A C G T A C T G A G T C C G T A A C G T A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G T A
A C G T A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGCATCTGGGGCA
TGCCCTGAGGGCA
 A C G T A C T G A G T C C G T A A C G T A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

ZNF143/MA0088.2/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGCATCTGGGGCA
CAATGCATTGTGGGTA
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G T A
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TGCATCTGGGGCA
NNTNCGCACCTGTNGAN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G T A
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

Bhlha15/MA0607.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGCATCTGGGGCA
-ACATATGG----
 A C G T A C T G A G T C C G T A A C G T A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G T A
A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T A C G T A C G T