Information for 19-ATGCACAAAG (Motif 25)

C T G A C G A T T C A G A G T C T C G A G A T C G T C A G C T A C G T A T C A G
Reverse Opposite:
A G T C G C A T C A G T C A G T C A T G A G C T C T A G A G T C G C T A A G C T
p-value:1e-12
log p-value:-2.864e+01
Information Content per bp:1.660
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets53.6 +/- 26.2bp
Average Position of motif in Background51.0 +/- 6.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:ATGCACAAAG
----ACAAAG
 C T G A C G A T T C A G A G T C T C G A G A T C G T C A G C T A C G T A T C A G
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ATGCACAAAG-
-GGAACAAAGR
 C T G A C G A T T C A G A G T C T C G A G A T C G T C A G C T A C G T A T C A G A C G T
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:ATGCACAAAG-
-VRRACAAWGG
 C T G A C G A T T C A G A G T C T C G A G A T C G T C A G C T A C G T A T C A G A C G T
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ATGCACAAAG-----
AGAAGAACAAAGGACTA
 A C G T A C G T C T G A C G A T T C A G A G T C T C G A G A T C G T C A G C T A C G T A T C A G A C G T A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ATGCACAAAG-----
ATAAGAACAAAGGACTA
 A C G T A C G T C T G A C G A T T C A G A G T C T C G A G A T C G T C A G C T A C G T A T C A G A C G T A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:ATGCACAAAG------
----ACAAAGGNBCCT
 C T G A C G A T T C A G A G T C T C G A G A T C G T C A G C T A C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:ATGCACAAAG-
---RACAAWGG
 C T G A C G A T T C A G A G T C T C G A G A T C G T C A G C T A C G T A T C A G A C G T
A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

PB0166.1_Sox12_2/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ATGCACAAAG----
AAACAGACAAAGGAAT
 A C G T A C G T C T G A C G A T T C A G A G T C T C G A G A T C G T C A G C T A C G T A T C A G A C G T A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PH0148.1_Pou3f3/Jaspar

Match Rank:9
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----ATGCACAAAG--
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C G T A C G T C T G A C G A T T C A G A G T C T C G A G A T C G T C A G C T A C G T A T C A G A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:ATGCACAAAG-
---AACAAAGG
 C T G A C G A T T C A G A G T C T C G A G A T C G T C A G C T A C G T A T C A G A C G T
A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G