Information for 3-GCAGGNGGCAGGCGGG (Motif 20)

A T C G A G T C C T G A A C T G C T A G T G A C A T C G A T C G T A G C T C G A A C T G A T C G A T G C T A C G A T C G A T C G
Reverse Opposite:
A T G C A T G C A T G C A T C G T A G C A G T C A G C T A T C G T A G C T A G C A C T G A G T C A G T C G A C T T C A G T A G C
p-value:1e-14
log p-value:-3.425e+01
Information Content per bp:1.690
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets45.8 +/- 25.6bp
Average Position of motif in Background75.6 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GCAGGNGGCAGGCGGG--
---GGGNGGGGGCGGGGC
 A T C G A G T C C T G A A C T G C T A G T G A C A T C G A T C G T A G C T C G A A C T G A T C G A T G C T A C G A T C G A T C G A C G T A C G T
A C G T A C G T A C G T T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

PB0097.1_Zfp281_1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GCAGGNGGCAGGCGGG--
---GGGGGGGGGGGGGGA
 A T C G A G T C C T G A A C T G C T A G T G A C A T C G A T C G T A G C T C G A A C T G A T C G A T G C T A C G A T C G A T C G A C G T A C G T
A C G T A C G T A C G T A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A

PB0124.1_Gabpa_2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGNGGCAGGCGGG
NNNNGGGGGAAGANGG-
 A C G T A T C G A G T C C T G A A C T G C T A G T G A C A T C G A T C G T A G C T C G A A C T G A T C G A T G C T A C G A T C G A T C G
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GCAGGNGGCAGGCGGG
----GTGGGGGAGGGG
 A T C G A G T C C T G A A C T G C T A G T G A C A T C G A T C G T A G C T C G A A C T G A T C G A T G C T A C G A T C G A T C G
A C G T A C G T A C G T A C G T C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:GCAGGNGGCAGGCGGG--
-------GGGGGCGGGGC
 A T C G A G T C C T G A A C T G C T A G T G A C A T C G A T C G T A G C T C G A A C T G A T C G A T G C T A C G A T C G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

EGR1/MA0162.2/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCAGGNGGCAGGCGGG-
---GGCGGGGGCGGGGG
 A T C G A G T C C T G A A C T G C T A G T G A C A T C G A T C G T A G C T C G A A C T G A T C G A T G C T A C G A T C G A T C G A C G T
A C G T A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GCAGGNGGCAGGCGGG
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A T C G A G T C C T G A A C T G C T A G T G A C A T C G A T C G T A G C T C G A A C T G A T C G A T G C T A C G A T C G A T C G
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCAGGNGGCAGGCGGG-----
----NAGANTGGCGGGGNGNA
 A T C G A G T C C T G A A C T G C T A G T G A C A T C G A T C G T A G C T C G A A C T G A T C G A T G C T A C G A T C G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

E2F6/MA0471.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCAGGNGGCAGGCGGG
--GGGCGGGAAGG---
 A T C G A G T C C T G A A C T G C T A G T G A C A T C G A T C G T A G C T C G A A C T G A T C G A T G C T A C G A T C G A T C G
A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T

ZNF263/MA0528.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCAGGNGGCAGGCGGG-----
GGAGGAGGAGGGGGAGGAGGA
 A T C G A G T C C T G A A C T G C T A G T G A C A T C G A T C G T A G C T C G A A C T G A T C G A T G C T A C G A T C G A T C G A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A