Information for 13-CTCTGGGCTT (Motif 19)

A T G C G C A T A T G C C G A T A C T G C T A G C A T G G A T C A G C T A G C T
Reverse Opposite:
C T G A C T G A C T A G G T A C A G T C A G T C C G T A T A C G C G T A T A C G
p-value:1e-8
log p-value:-1.998e+01
Information Content per bp:1.824
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.73%
Number of Background Sequences with motif216.3
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets69.8 +/- 16.8bp
Average Position of motif in Background51.1 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CTCTGGGCTT
WDNCTGGGCA-
 A C G T A T G C G C A T A T G C C G A T A C T G C T A G C A T G G A T C A G C T A G C T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CTCTGGGCTT
TCACCTCTGGGCAG
 A C G T A C G T A C G T A C G T A T G C G C A T A T G C C G A T A C T G C T A G C A T G G A T C A G C T A G C T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTCTGGGCTT
GTCTGTGGTTT-
 A C G T A C G T A T G C G C A T A T G C C G A T A C T G C T A G C A T G G A T C A G C T A G C T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTCTGGGCTT
GCCTCAGGGCAT
 A C G T A C G T A T G C G C A T A T G C C G A T A C T G C T A G C A T G G A T C A G C T A G C T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTCTGGGCTT-
---NGGGATTA
 A T G C G C A T A T G C C G A T A C T G C T A G C A T G G A T C A G C T A G C T A C G T
A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGGGCTT--
TGGACTTTGNNCTNTG
 A C G T A C G T A C G T A C G T A T G C G C A T A T G C C G A T A C T G C T A G C A T G G A T C A G C T A G C T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGGGCTT-
TGGACTTTGNNCTCN
 A C G T A C G T A C G T A C G T A T G C G C A T A T G C C G A T A C T G C T A G C A T G G A T C A G C T A G C T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTCTGGGCTT
GGTCTGGCAT-
 A C G T A T G C G C A T A T G C C G A T A C T G C T A G C A T G G A T C A G C T A G C T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGGGCTT-----
NNATTGGACTTTNGNN
 A C G T A T G C G C A T A T G C C G A T A C T G C T A G C A T G G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CTCTGGGCTT-
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G C A T A T G C C G A T A C T G C T A G C A T G G A T C A G C T A G C T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G