Information for 11-GGCGGTTTCC (Motif 16)

A T C G A C T G A T G C A C T G A C T G A G C T A G C T A G C T A G T C A G T C
Reverse Opposite:
A C T G A C T G C T G A T C G A C T G A A G T C G T A C A T C G A G T C T A G C
p-value:1e-10
log p-value:-2.360e+01
Information Content per bp:1.851
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.86%
Number of Background Sequences with motif195.4
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets55.4 +/- 27.7bp
Average Position of motif in Background53.4 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GGCGGTTTCC
GGGGATTTCC
 A T C G A C T G A T G C A C T G A C T G A G C T A G C T A G C T A G T C A G T C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GGCGGTTTCC
GGGGATTTCC
 A T C G A C T G A T G C A C T G A C T G A G C T A G C T A G C T A G T C A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GGCGGTTTCC
GGGAATTTCC
 A T C G A C T G A T G C A C T G A C T G A G C T A G C T A G C T A G T C A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GGCGGTTTCC-
NGGGGATTTCCC
 A C G T A T C G A C T G A T G C A C T G A C T G A G C T A G C T A G C T A G T C A G T C A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGCGGTTTCC
TTGCGGTTT--
 A C G T A T C G A C T G A T G C A C T G A C T G A G C T A G C T A G C T A G T C A G T C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGCGGTTTCC
GGGAATTTCC
 A T C G A C T G A T G C A C T G A C T G A G C T A G C T A G C T A G T C A G T C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

PB0201.1_Zfp281_2/Jaspar

Match Rank:7
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------GGCGGTTTCC-
NNNATTGGGGGTNTCCT
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A T G C A C T G A C T G A G C T A G C T A G C T A G T C A G T C A C G T
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GGCGGTTTCC--
--TGGTTTCAGT
 A T C G A C T G A T G C A C T G A C T G A G C T A G C T A G C T A G T C A G T C A C G T A C G T
A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGCGGTTTCC---
-GGGGATTCCCCC
 A T C G A C T G A T G C A C T G A C T G A G C T A G C T A G C T A G T C A G T C A C G T A C G T A C G T
A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

RUNX3/MA0684.1/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGCGGTTTCC
TTTGCGGTTT--
 A C G T A C G T A T C G A C T G A T G C A C T G A C T G A G C T A G C T A G C T A G T C A G T C
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T